RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 TMEFF1Q8IYR6 380 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 OR7A2PQ8NGA2 310 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 EGLN2Q96KS0 407 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 RNF145Q96MT1 663 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 SORBS1Q9BX66 1292 aaKnown RBP7.96□□□□□ -1.13
ABCA4-207ENST00000536513 SLC2A11Q9BYW1 496 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 STN1Q9H668 368 aaKnown RBP7.96□□□□□ -1.13
ABCA4-207ENST00000536513 FANCEQ9HB96 536 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 POLE4Q9NR33 117 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 PHPT1Q9NRX4 125 aaPredicted RBP7.96□□□□□ -1.13
ABCA4-207ENST00000536513 INTS7Q9NVH2 962 aaKnown RBP7.96□□□□□ -1.13
ABCA4-207ENST00000536513 C5AR2Q9P296 337 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 ALPK2Q86TB3 2170 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 ARPC4-TTLL3A0A0A6YYG9 625 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 B4DGG1 531 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 CCRL2O00421 344 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 TRIM38O00635 465 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 TMEM127O75204 238 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 G6PDP11413 515 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 ATP6V1B2P21281 511 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 ATP6V1E1P36543 226 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 SLC7A2P52569 658 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 PRKAG1P54619 331 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 HSD17B7P56937 341 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 DEFA1P59665 94 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 DEFA3P59666 94 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 NFKB2Q00653 900 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 PRRT3Q5FWE3 981 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 FGD3Q5JSP0 725 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 HMGN2P46Q86SG4 172 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 SFRP1Q8N474 314 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 METTL25Q8N6Q8 603 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 FAM46DQ8NEK8 389 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 ZBTB18Q99592 522 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 OSBPL10Q9BXB5 764 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 DPY30Q9C005 99 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 TMPRSS11EQ9UL52 423 aa7.96□□□□□ -1.13
ABCA4-207ENST00000536513 PCYT1BQ9Y5K3 369 aaPredicted RBP7.96□□□□□ -1.13
ABCA4-207ENST00000536513 PLXNA4Q9HCM2 1894 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 A0A1B0GTW7 788 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 ARHGEF33A8MVX0 844 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 TMEM114B3SHH9 223 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 CLDN25C9JDP6 229 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 GAPDHSO14556 408 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-207ENST00000536513 CCNKO75909 580 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 OTCP00480 354 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 MYF5P13349 255 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 AOC1P19801 751 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 INPP1P49441 399 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 TIAL1Q01085 375 aaKnown RBP eCLIP7.96□□□□□ -1.14
ABCA4-207ENST00000536513 ACSM2AQ08AH3 577 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 LRRC74AQ0VAA2 488 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 ZBED5Q49AG3 693 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 ACSM2BQ68CK6 577 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 TMEM92Q6UXU6 159 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 UNC5DQ6UXZ4 953 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 ZNF621Q6ZSS3 439 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 OR8H2Q8N162 312 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 CCM2Q9BSQ5 444 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 EXOSC4Q9NPD3 245 aaKnown RBP7.96□□□□□ -1.14
ABCA4-207ENST00000536513 RIC8BQ9NVN3 520 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 CLCA2Q9UQC9 943 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 DYRK1BQ9Y463 629 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 FRMPD3Q5JV73 1810 aa7.96□□□□□ -1.14
ABCA4-207ENST00000536513 A6NJY4 79 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 E7EQ34 232 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 KRT6AP02538 564 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 KRT6BP04259 564 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 KRT6CP48668 564 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 IST1P53990 364 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 MTPNP58546 118 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 CDKL1Q00532 357 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 ZNF846Q147U1 533 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 IRF4Q15306 451 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 PCBP2Q15366 365 aaKnown RBP eCLIP7.95□□□□□ -1.14
ABCA4-207ENST00000536513 TYSND1Q2T9J0 566 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 RFTN2Q52LD8 501 aaPredicted RBP7.95□□□□□ -1.14
ABCA4-207ENST00000536513 RABL3Q5HYI8 236 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 EPGNQ6UW88 154 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 MTSS1LQ765P7 747 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 PAGE2Q7Z2X7 111 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 C11orf74Q86VG3 221 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 LSRQ86X29 649 aaPredicted RBP7.95□□□□□ -1.14
ABCA4-207ENST00000536513 ZC3H7AQ8IWR0 971 aaKnown RBP7.95□□□□□ -1.14
ABCA4-207ENST00000536513 ETFBKMTQ8IXQ9 262 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 RP9Q8TA86 221 aaKnown RBP7.95□□□□□ -1.14
ABCA4-207ENST00000536513 FBXO30Q8TB52 745 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 HLA-CQ95604 372 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 CXorf40BQ96DE9 158 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 DTD2Q96FN9 168 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 TOE1Q96GM8 510 aaKnown RBP7.95□□□□□ -1.14
ABCA4-207ENST00000536513 FCRL4Q96PJ5 515 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 CPEB1Q9BZB8 566 aaKnown RBP7.95□□□□□ -1.14
ABCA4-207ENST00000536513 SLAMF8Q9P0V8 285 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 NDUFAF1Q9Y375 327 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 TSC2P49815 1807 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 PATJQ8NI35 1801 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 TCF20Q9UGU0 1960 aaKnown RBP7.95□□□□□ -1.14
ABCA4-207ENST00000536513 MGAT4DA6NG13 374 aa7.95□□□□□ -1.14
ABCA4-207ENST00000536513 CCDC154A6NI56 674 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms