RNA–Protein interactions for RNA: ENST00000536256.3

ABCC4-206, Transcript of ATP binding cassette subfamily C member 4, human

TSL 2 BASIC

Gene ABCC4, Length 2,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCC4-206	ENST00000536256	CCR2	P41597	374 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	CRYBA2	P53672	197 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	RPP38	P78345	283 aa	Known RBP	12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	FOXD4	Q12950	439 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	ARSI	Q5FYB1	569 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	PGBD3	Q8N328	593 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	CYB5D2	Q8WUJ1	264 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	TMEM159	Q96B96	161 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	ZNF347	Q96SE7	839 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	LINC00597	Q9H2U6	94 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	ARMC7	Q9H6L4	198 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	RUBCNL	Q9H714	662 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	PALMD	Q9NP74	551 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	GNG14	A0A1W2PPG7	69 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	FUOM	A2VDF0	154 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	SCAMP2	O15127	329 aa	Known RBP	12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	UGDH	O60701	494 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	FAM20B	O75063	409 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	GABARAP	O95166	117 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	JUND	P17535	347 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	RAE1	P78406	368 aa	Known RBP	12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	TSTA3	Q13630	321 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	CLCA4	Q14CN2	919 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	MAD2L1BP	Q15013	274 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	ACOX1	Q15067	660 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	KIAA1614	Q5VZ46	1190 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	EGFLAM	Q63HQ2	1017 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	CNKSR3	Q6P9H4	555 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	SNX29P2	Q8IUI4	249 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	RAVER1	Q8IY67	606 aa	Known RBP	12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	SYNPO	Q8N3V7	929 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	CHPT1	Q8WUD6	406 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	RAPGEFL1	Q9UHV5	662 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	ZNF451	Q9Y4E5	1061 aa		12.82	□□□□□ -0.36
ABCC4-206	ENST00000536256	CLDN25	C9JDP6	229 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	GBA	P04062	536 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	PBLD	P30039	288 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	WEE1	P30291	646 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	CREM	Q03060	361 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	NPRL3	Q12980	569 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	GAB1	Q13480	694 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	CYP2A13	Q16696	494 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	TRIM60	Q495X7	471 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256		Q6ZPB1	254 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	GPR155	Q7Z3F1	870 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	TSPYL5	Q86VY4	417 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	NAGS	Q8N159	534 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	LMNTD1	Q8N9Z9	388 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	HUS1B	Q8NHY5	278 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	C11orf24	Q96F05	449 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	CEP44	Q9C0F1	390 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	PCM1	Q15154	2024 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	MGAT4D	A6NG13	374 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	TTC34	A8MYJ7	566 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	SUV39H1	O43463	412 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	RGS10	O43665	173 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	PCDHGA12	O60330	932 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	PSIP1	O75475	530 aa	Known RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	OPN1SW	P03999	348 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	CYP2A6	P11509	494 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	TYR	P14679	529 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	PCSK2	P16519	638 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	LAG3	P18627	525 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	TNFRSF1B	P20333	461 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	PDHA2	P29803	388 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	RRM2	P31350	389 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	VIPR1	P32241	457 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	KRT20	P35900	424 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	CXCR4	P61073	352 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	CAMK2G	Q13555	558 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	KCNC3	Q14003	757 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	RGN	Q15493	299 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	TMEM215	Q68D42	235 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	GPR153	Q6NV75	609 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	BRAT1	Q6PJG6	821 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	NEK10	Q6ZWH5	1172 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	AHSA2	Q719I0	299 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	ADIPOR2	Q86V24	386 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	P2RY8	Q86VZ1	359 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	RASGEF1A	Q8N9B8	481 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	VPS37A	Q8NEZ2	397 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	OR7G3	Q8NG95	312 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	ZFP90	Q8TF47	636 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	ERLEC1	Q96DZ1	483 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	C7orf34	Q96L11	122 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	SAMD11	Q96NU1	681 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	ALOXE3	Q9BYJ1	711 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	CHCHD3	Q9NX63	227 aa	Known RBP	12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	SELENON	Q9NZV5	590 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	ERVW-1	Q9UQF0	538 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256	HSPE1-MOB4	S4R3N1	261 aa		12.81	□□□□□ -0.36
ABCC4-206	ENST00000536256		H0YIV9	168 aa		12.8	□□□□□ -0.36
ABCC4-206	ENST00000536256	PCDH7	O60245	1069 aa		12.8	□□□□□ -0.36
ABCC4-206	ENST00000536256	LILRB3	O75022	631 aa		12.8	□□□□□ -0.36
ABCC4-206	ENST00000536256	NADK	O95544	446 aa	Predicted RBP	12.8	□□□□□ -0.36
ABCC4-206	ENST00000536256	ZNF30	P17039	623 aa		12.8	□□□□□ -0.36
ABCC4-206	ENST00000536256	ACVR2A	P27037	513 aa		12.8	□□□□□ -0.36
ABCC4-206	ENST00000536256	IMPA1	P29218	277 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms