RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 OR4K2Q8NGD2 314 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 DEDD2Q8WXF8 326 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ELMO1Q92556 727 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 NELL1Q92832 810 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 IGSF8Q969P0 613 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ULK4Q96C45 1275 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 TRMT61AQ96FX7 289 aaKnown RBP6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ZFYVE19Q96K21 471 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 CEP19Q96LK0 163 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 GPR137Q96N19 417 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 MGLLQ99685 303 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 MGME1Q9BQP7 344 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ZBED2Q9BTP6 218 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 SPATA9Q9BWV2 254 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 C1QTNF7Q9BXJ2 289 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ZNF717Q9BY31 904 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ZYG11BQ9C0D3 744 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 RACGAP1Q9H0H5 632 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ABHD16BQ9H3Z7 469 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 FAM83DQ9H4H8 585 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 IPPKQ9H8X2 491 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ZNF556Q9HAH1 456 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 TRIM39Q9HCM9 518 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 GIMAP4Q9NUV9 329 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 TAS2R16Q9NYV7 291 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 SH3BP4Q9P0V3 963 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 CACNG4Q9UBN1 327 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 SEC14L4Q9UDX3 406 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 FTSJ1Q9UET6 329 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ELF5Q9UKW6 265 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-215ENST00000536145 NUP50Q9UKX7 468 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 TMPRSS11EQ9UL52 423 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 VPS9D1Q9Y2B5 631 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 POFUT2Q9Y2G5 429 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 DLGAP4Q9Y2H0 992 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 PADI2Q9Y2J8 665 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 CMAHPQ9Y471 501 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 ARIH1Q9Y4X5 557 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-215ENST00000536145 OARD1Q9Y530 152 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 TIMM13Q9Y5L4 95 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-215ENST00000536145 PPP2R3BQ9Y5P8 575 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 PLXNA3P51805 1871 aa6.7□□□□□ -1.34
CPSF7-215ENST00000536145 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-215ENST00000536145 A0A1W2PQ72 361 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 PRAMEF25A6NGN4 478 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 OR6C70A6NIJ9 312 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 ZAR1LA6NP61 321 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 CLIC1O00299 241 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 TEX28O15482 410 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 FFAR2O15552 330 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 AKR7A2O43488 359 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 OR1I1O60431 355 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 TMCC2O75069 709 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 CPNE3O75131 537 aaKnown RBP6.69□□□□□ -1.34
CPSF7-215ENST00000536145 F11P03951 625 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 SCG5P05408 212 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 MMP3P08254 477 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 GSTM1P09488 218 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 C1SP09871 688 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 CCNYL3P0C7X3 344 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 PIRTP0C851 137 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 ANXA8P13928 327 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 CTRB1P17538 263 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 ENGP17813 658 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 SDC1P18827 310 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 RPS3P23396 243 aaKnown RBP eCLIP6.69□□□□□ -1.34
CPSF7-215ENST00000536145 TACR1P25103 407 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 HOXD9P28356 352 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-215ENST00000536145 PCSK1P29120 753 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 PCGF2P35227 344 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 ACVRL1P37023 503 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 PIK3CGP48736 1102 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 HSPA7P48741 367 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 NUDT6P53370 316 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 CLDN20P56880 219 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 SCN1BQ07699 218 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 VGLL4Q14135 290 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 BOP1Q14137 746 aaKnown RBP6.69□□□□□ -1.34
CPSF7-215ENST00000536145 GPR19Q15760 415 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 GPR162Q16538 588 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 DUOXA1Q1HG43 343 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 PTCHD3Q3KNS1 767 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 TIGD5Q53EQ6 642 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 ZNF628Q5EBL2 1059 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 PLAG1Q6DJT9 500 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 CTRB2Q6GPI1 263 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 PDE12Q6L8Q7 609 aaKnown RBP6.69□□□□□ -1.34
CPSF7-215ENST00000536145 TRILQ7L0X0 811 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 ZNF598Q86UK7 904 aaKnown RBP6.69□□□□□ -1.34
CPSF7-215ENST00000536145 KRT73Q86Y46 540 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 LAX1Q8IWV1 398 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 C9orf62Q8N4C0 152 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 STX19Q8N4C7 294 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 FBXL6Q8N531 539 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 SLC5A8Q8N695 610 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 EFHBQ8N7U6 833 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 OR10G2Q8NGC3 310 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 SCAMP5Q8TAC9 235 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 TMEM80Q96HE8 168 aa6.69□□□□□ -1.34
CPSF7-215ENST00000536145 FRMD6Q96NE9 622 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms