RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 FOXS1O43638 330 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 OR1F1O43749 312 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 S100BP04271 92 aaPredicted RBP17.04■□□□□ 0.32
DDX55-204ENST00000536079 KLK3P07288 261 aaPredicted RBP17.04■□□□□ 0.32
DDX55-204ENST00000536079 HBQ1P09105 142 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 FURINP09958 794 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 C1GALT1C1LP0DN25 315 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 SCTRP47872 440 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 FAM219BQ5XKK7 198 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 ENDOVQ8N8Q3 282 aaKnown RBP17.04■□□□□ 0.32
DDX55-204ENST00000536079 TTC29Q8NA56 475 aaPredicted RBP17.04■□□□□ 0.32
DDX55-204ENST00000536079 KCT2Q8NC54 265 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 SLC45A3Q96JT2 553 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 SARGQ9BW04 601 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 C12orf65Q9H3J6 166 aaKnown RBP17.04■□□□□ 0.32
DDX55-204ENST00000536079 ACSS2Q9NR19 701 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 GEMIN8Q9NWZ8 242 aaKnown RBP17.04■□□□□ 0.32
DDX55-204ENST00000536079 NDOR1Q9UHB4 597 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 EMCNQ9ULC0 261 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 SRPK3Q9UPE1 567 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 MAU2Q9Y6X3 613 aa17.04■□□□□ 0.32
DDX55-204ENST00000536079 A0A1B0GX78 115 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 TRBC2A0A5B9 178 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 SYCE1LA8MT33 242 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 IPO13O94829 963 aaKnown RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 RBP1P09455 135 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 GFAPP14136 432 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 ALDH18A1P54886 795 aaKnown RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 DCDP81605 110 aaKnown RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 DOC2AQ14183 400 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 SLBPQ14493 270 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX55-204ENST00000536079 RASA2Q15283 850 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 PDK4Q16654 411 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 TSNAXIP1Q2TAA8 658 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 NKAIN1Q4KMZ8 207 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 ATG9BQ674R7 924 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 ADNP2Q6IQ32 1131 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 RPS27LQ71UM5 84 aaKnown RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 PRSS41Q7RTY9 318 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 LRRC70Q7Z2Q7 622 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 PTGR2Q8N8N7 351 aaPredicted RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 PROKR1Q8TCW9 393 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 SNRNP27Q8WVK2 155 aaKnown RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 STARD8Q92502 1023 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 RERGQ96A58 199 aaPredicted RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 PHF21BQ96EK2 531 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 CABS1Q96KC9 395 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 AICDAQ9GZX7 198 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 ACTL8Q9H568 366 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 CNOT10Q9H9A5 744 aaKnown RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 TXLNGQ9NUQ3 528 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 PLAAQ9Y263 795 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 FARSAQ9Y285 508 aaKnown RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 PCDHGA6Q9Y5G7 932 aa17.03■□□□□ 0.32
DDX55-204ENST00000536079 MDC1Q14676 2089 aaKnown RBP17.03■□□□□ 0.32
DDX55-204ENST00000536079 CACNA1BQ00975 2339 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 CCDC189A1A4V9 331 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 C21orf140B9A014 251 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 K7EPI3 171 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 FFAR3O14843 346 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 GPR42O15529 346 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 ONECUT2O95948 504 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 B3GALT4O96024 378 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 PRKAR1AP10644 381 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 GNAZP19086 355 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 PTPN4P29074 926 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 ARSFP54793 590 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 UCNP55089 124 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 IL10RAQ13651 578 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 VN1R5Q7Z5H4 357 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 ASPGQ86U10 573 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 TEX9Q8N6V9 391 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 ACMSDQ8TDX5 336 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 CREB3L4Q8TEY5 395 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 SLC13A3Q8WWT9 602 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 KIAA1143Q96AT1 154 aaPredicted RBP17.02■□□□□ 0.32
DDX55-204ENST00000536079 THAP11Q96EK4 314 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 NSUN5Q96P11 429 aaKnown RBP17.02■□□□□ 0.32
DDX55-204ENST00000536079 MRPL57Q9BQC6 102 aaKnown RBP17.02■□□□□ 0.32
DDX55-204ENST00000536079 MRPL46Q9H2W6 279 aaKnown RBP17.02■□□□□ 0.32
DDX55-204ENST00000536079 GPRC5BQ9NZH0 403 aa17.02■□□□□ 0.32
DDX55-204ENST00000536079 RALYQ9UKM9 306 aaKnown RBP17.02■□□□□ 0.32
DDX55-204ENST00000536079 ZNF490Q9ULM2 529 aaPredicted RBP17.02■□□□□ 0.32
DDX55-204ENST00000536079 A0A0A6YYC8 382 aaPredicted RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 I3L1I5 382 aaPredicted RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 E2F3O00716 465 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 DNAJB6O75190 326 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 CDH16O75309 829 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 KLF7O75840 302 aaPredicted RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 TBX6O95947 436 aaPredicted RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 KRT15P19012 456 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 AGXTP21549 392 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 EEF1DP29692 281 aaKnown RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 HYAL2Q12891 473 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 CHIT1Q13231 466 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 ERV3-1Q14264 604 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 NCF4Q15080 339 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 RBBP5Q15291 538 aaKnown RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 PCBP2Q15366 365 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDX55-204ENST00000536079 FAM214AQ32MH5 1076 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms