RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 IPCEF1Q8WWN9 437 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 S100ZQ8WXG8 99 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 CHST8Q9H2A9 424 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 ADPRHL2Q9NX46 363 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 STOX2Q9P2F5 926 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 NFKBIL1Q9UBC1 381 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 FUOMA2VDF0 154 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 E9PQ18 207 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 NRG2O14511 850 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 CATP04040 527 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 ANXA4P09525 319 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 EPHA2P29317 976 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 MAPK9P45984 424 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 MAP2K4P45985 399 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 RPP38P78345 283 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 RAE1P78406 368 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 DMC1Q14565 340 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 RGNQ15493 299 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 TEAD4Q15561 434 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 ADPRMQ3LIE5 342 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 SPIN4Q56A73 249 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 HENMT1Q5T8I9 393 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 LAIR1Q6GTX8 287 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 CCDC149Q6ZUS6 474 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 TMCO2Q7Z6W1 182 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 P2RY8Q86VZ1 359 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 TMCO5AQ8N6Q1 288 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 ZNF557Q8N988 423 aaPredicted RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 CDC26Q8NHZ8 85 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 ZFP90Q8TF47 636 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 BTN2A2Q8WVV5 523 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 MED8Q96G25 268 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 TPD52L3Q96J77 140 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 CAPNS2Q96L46 248 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 OR4K3Q96R72 315 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 PITX2Q99697 317 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 HEPHQ9BQS7 1158 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 WDR12Q9GZL7 423 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 AASSQ9UDR5 926 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 PADI2Q9Y2J8 665 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 SH3GLB1Q9Y371 365 aa15.47■□□□□ 0.07
CHMP1A-202ENST00000535997 TMEM202A6NGA9 273 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 EFNA1P20827 205 aaPredicted RBP15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 IDSP22304 550 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 ETV3P41162 512 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 KCNJ10P78508 379 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 KCNC4Q03721 635 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 ARHGEF6Q15052 776 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 DGUOKQ16854 277 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 LDLRAP1Q5SW96 308 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 LILRA6Q6PI73 481 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 RAVER1Q8IY67 606 aaKnown RBP15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 C1orf52Q8N6N3 182 aaKnown RBP15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 OR7G3Q8NG95 312 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 OR56A3Q8NH54 315 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 GLMNQ92990 594 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 VWCEQ96DN2 955 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 HRASLS5Q96KN8 279 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 DOHHQ9BU89 302 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 RIOK2Q9BVS4 552 aaKnown RBP15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 ACOT13Q9NPJ3 140 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 CCL26Q9Y258 94 aa15.46■□□□□ 0.07
CHMP1A-202ENST00000535997 MGAT4DA6NG13 374 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 NEDD8-MDP1E9PL57 170 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 ETHE1O95571 254 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 SERPINB10P48595 397 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 PSMD7P51665 324 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 CRYBA2P53672 197 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 PRMT2P55345 433 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 CAMK2GQ13555 558 aaPredicted RBP15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 ATP1A4Q13733 1029 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 E2F2Q14209 437 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 SF1Q15637 639 aaKnown RBP15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 SYTL3Q4VX76 610 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 NIPAL1Q6NVV3 410 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 ADIPOR2Q86V24 386 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 NPAS3Q8IXF0 933 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 FAM210AQ96ND0 272 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 ZNF300Q96RE9 604 aaPredicted RBP15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 KCNE2Q9Y6J6 123 aa15.46■□□□□ 0.06
CHMP1A-202ENST00000535997 ABHD14A-ACY1A0A1B0GW23 586 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 FADS2P1A8MWK0 482 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 RNASET2O00584 256 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 KPNA4O00629 521 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 TSPAN6O43657 245 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 MAN1A2O60476 641 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 FAM20BO75063 409 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 ATG13O75143 517 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 SLC16A8O95907 504 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 MT-ND2P03891 347 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 FUCA1P04066 466 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 C8AP07357 584 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 NUDT7P0C024 238 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 CTSAP10619 480 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 PORP16435 677 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 IDUAP35475 653 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 PPM1AP35813 382 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 HPCAL1P37235 193 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 MASP1P48740 699 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 CD97P48960 835 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms