RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 NAF1Q96HR8 494 aaKnown RBP11.52□□□□□ -0.57
CHD4-203ENST00000535717 NSUN5Q96P11 429 aaKnown RBP11.52□□□□□ -0.57
CHD4-203ENST00000535717 AIF1LQ9BQI0 150 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 EHD1Q9H4M9 534 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 IPPKQ9H8X2 491 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 ACSS2Q9NR19 701 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 GEMIN8Q9NWZ8 242 aaKnown RBP11.52□□□□□ -0.57
CHD4-203ENST00000535717 SENP1Q9P0U3 644 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 SLC17A7Q9P2U7 560 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 RAXQ9Y2V3 346 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 ANGPTL3Q9Y5C1 460 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 LAMA5O15230 3695 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 CFAP47Q6ZTR5 3102 aa11.52□□□□□ -0.57
CHD4-203ENST00000535717 URB1O60287 2271 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 USP24Q9UPU5 2620 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 HYKKA2RU49 373 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 AGPSO00116 658 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 OR7A17O14581 309 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 TYROBPO43914 113 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 RAD1O60671 282 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 H2AFYO75367 372 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 WFS1O76024 890 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 MED26O95402 600 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 RPS17P08708 135 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 MYL2P10916 166 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 CPA3P15088 417 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 RORAP35398 523 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 EIF2S3P41091 472 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 SCTRP47872 440 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 PIK3CGP48736 1102 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 PRKAA2P54646 552 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 HERVK_113P63132 956 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 IRF8Q02556 426 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 GPS2Q13227 327 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 CLN3Q13286 438 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 E2F2Q14209 437 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 MAP7Q14244 749 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 GRM7Q14831 915 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 RBBP5Q15291 538 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 TBCCQ15814 346 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 RHBDD2Q6NTF9 364 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 RPS27LQ71UM5 84 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 HDXQ7Z353 690 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 SLC22A9Q8IVM8 553 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 NLGN4XQ8N0W4 816 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 ARHGEF39Q8N4T4 335 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 TBC1D19Q8N5T2 526 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 ANKRD53Q8N9V6 530 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 ARMC2Q8NEN0 867 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 NLGN4YQ8NFZ3 816 aaPredicted RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 RDH11Q8TC12 318 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 ZNF483Q8TF39 744 aaPredicted RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 KCNE4Q8WWG9 221 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 NKD1Q969G9 470 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 CLIP3Q96DZ5 547 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 MOCOSQ96EN8 888 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 PTCD3Q96EY7 689 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 CNTNAP3BQ96NU0 1288 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 TMEM237Q96Q45 408 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 MACROD1Q9BQ69 325 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 NDC1Q9BTX1 674 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 C1QTNF3Q9BXJ4 246 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 ERVK-6Q9BXR3 956 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 CNTNAP3Q9BZ76 1288 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 IQCGQ9H095 443 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 AKIRIN1Q9H9L7 192 aaPredicted RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 ZBTB26Q9HCK0 441 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 DHCR7Q9UBM7 475 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 ZNF490Q9ULM2 529 aaPredicted RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 RUVBL1Q9Y265 456 aaKnown RBP11.51□□□□□ -0.57
CHD4-203ENST00000535717 SEC16AO15027 2179 aa11.51□□□□□ -0.57
CHD4-203ENST00000535717 MEN1O00255 615 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 KATNA1O75449 491 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 HBQ1P09105 142 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 IMPDH1P20839 514 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 CXCR2P25025 360 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 AHRP35869 848 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 ARSFP54793 590 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 SNRPNP63162 240 aaKnown RBP11.5□□□□□ -0.57
CHD4-203ENST00000535717 UNC50Q53HI1 259 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 ZNF678Q5SXM1 525 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 C1orf189Q5VU69 101 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 YOD1Q5VVQ6 348 aaPredicted RBP11.5□□□□□ -0.57
CHD4-203ENST00000535717 ZNF385CQ66K41 422 aaPredicted RBP11.5□□□□□ -0.57
CHD4-203ENST00000535717 FAM199XQ6PEV8 388 aaPredicted RBP11.5□□□□□ -0.57
CHD4-203ENST00000535717 TMIGD1Q6UXZ0 262 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 TTLL10Q6ZVT0 673 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 ASPGQ86U10 573 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 CACNA2D3Q8IZS8 1091 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 DSELQ8IZU8 1212 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 KRT78Q8N1N4 520 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 DTWD1Q8N5C7 304 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 ESX1Q8N693 406 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 CCDC63Q8NA47 563 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 TTC29Q8NA56 475 aaPredicted RBP11.5□□□□□ -0.57
CHD4-203ENST00000535717 TCP10LQ8TDR4 215 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 SLC13A3Q8WWT9 602 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 CCDC126Q96EE4 140 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 L3HYPDHQ96EM0 354 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 C10orf90Q96M02 699 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms