RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 MICU2Q8IYU8 434 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 CENPLQ8N0S6 344 aaPredicted RBP6.4□□□□□ -1.38
USP28-202ENST00000535607 CHDHQ8NE62 594 aaPredicted RBP6.4□□□□□ -1.38
USP28-202ENST00000535607 KLHDC9Q8NEP7 349 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 PJA1Q8NG27 643 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 OR52E4Q8NGH9 312 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 OR5K1Q8NHB7 308 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 DYNC2LI1Q8TCX1 351 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 BPIFB1Q8TDL5 484 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 ZFP90Q8TF47 636 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 TMBIM1Q969X1 311 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 TMEM125Q96AQ2 219 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 FKBP10Q96AY3 582 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 NXNL1Q96CM4 212 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 TUBGCP3Q96CW5 907 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 C1GALT1C1Q96EU7 318 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 NEIL1Q96FI4 390 aaPredicted RBP6.4□□□□□ -1.38
USP28-202ENST00000535607 REXO5Q96IC2 774 aaKnown RBP6.4□□□□□ -1.38
USP28-202ENST00000535607 CEP19Q96LK0 163 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 AGAP4Q96P64 663 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 LGMNQ99538 433 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 ZBTB18Q99592 522 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 TRIM62Q9BVG3 475 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 ERVK-6Q9BXR3 956 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 GON7Q9BXV9 100 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 NELFAQ9H3P2 528 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 TOR3AQ9H497 397 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 MAGIXQ9H6Y5 334 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 SIAEQ9HAT2 523 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 IL1RL2Q9HB29 575 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 POPDC3Q9HBV1 291 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 ENTPD7Q9NQZ7 604 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 SDR39U1Q9NRG7 319 aaPredicted RBP6.4□□□□□ -1.38
USP28-202ENST00000535607 CCDC59Q9P031 241 aaKnown RBP6.4□□□□□ -1.38
USP28-202ENST00000535607 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.4□□□□□ -1.38
USP28-202ENST00000535607 VPS51Q9UID3 782 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 STOML2Q9UJZ1 356 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 CDH9Q9ULB4 789 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 POLHQ9Y253 713 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 BTBD3Q9Y2F9 522 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 DERAQ9Y315 318 aa6.4□□□□□ -1.38
USP28-202ENST00000535607 LOC100130705A0A1B0GUX0 176 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 SMIM35A0A1B0GVV1 85 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 PRR23AA6NEV1 266 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 A8MT66 165 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 B8ZZF3 427 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 EIF3FO00303 357 aaPredicted RBP6.39□□□□□ -1.39
USP28-202ENST00000535607 PLK4O00444 970 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 BCKDKO14874 412 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 SLC16A6O15403 523 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 SGTAO43765 313 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 MFSD11O43934 449 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 SNX2O60749 519 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 TRIM3O75382 744 aaPredicted RBP6.39□□□□□ -1.39
USP28-202ENST00000535607 MFN2O95140 757 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 ANGPTL1O95841 491 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 F9P00740 461 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 AHSGP02765 367 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 SMIM10L2AP0DMW4 78 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 SMIM10L2BP0DMW5 78 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 INSRRP14616 1297 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 GOT1P17174 413 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 IL1RNP18510 177 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 LPOP22079 712 aaPredicted RBP6.39□□□□□ -1.39
USP28-202ENST00000535607 PTPN3P26045 913 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 PSMB9P28065 219 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 IFNA8P32881 189 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 HTR7P34969 479 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 AVPR1AP37288 418 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 DDOSTP39656 456 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 CASRP41180 1078 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 YAP1P46937 504 aaKnown RBP6.39□□□□□ -1.39
USP28-202ENST00000535607 MAPK10P53779 464 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 CDH8P55286 799 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 TPI1P60174 286 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 IL5RAQ01344 420 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 CREMQ03060 361 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 EMX2Q04743 252 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 RAD51Q06609 339 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 LAMTOR4Q0VGL1 99 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 RIN1Q13671 783 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 KEAP1Q14145 624 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 GALNT3Q14435 633 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 STARD3Q14849 445 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 ZIK1Q3SY52 487 aaPredicted RBP6.39□□□□□ -1.39
USP28-202ENST00000535607 C5orf22Q49AR2 442 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 VPS26BQ4G0F5 336 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 WDR45BQ5MNZ6 344 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 LDLRAP1Q5SW96 308 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 ZNF691Q5VV52 312 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 KCTD11Q693B1 232 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 KIAA0930Q6ICG6 404 aaPredicted RBP6.39□□□□□ -1.39
USP28-202ENST00000535607 CNSTQ6PJW8 725 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 LRRC8DQ7L1W4 858 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 IFNEQ86WN2 208 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 KRT73Q86Y46 540 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 RAB43Q86YS6 212 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 CCDC28AQ8IWP9 274 aa6.39□□□□□ -1.39
USP28-202ENST00000535607 RIMKLAQ8IXN7 391 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms