RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 TCTE1Q5JU00 501 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 ZNF678Q5SXM1 525 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 FAM219BQ5XKK7 198 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 ADNP2Q6IQ32 1131 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 METTL2BQ6P1Q9 378 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 ARHGEF39Q8N4T4 335 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 CCDC63Q8NA47 563 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 OR52B6Q8NGF0 335 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 ZCCHC14Q8WYQ9 949 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 NKD1Q969G9 470 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 ARL8AQ96BM9 186 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 TLCD1Q96CP7 247 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 THAP11Q96EK4 314 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 PTCD3Q96EY7 689 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 NAF1Q96HR8 494 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 ERVK-6Q9BXR3 956 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 EHD1Q9H4M9 534 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 NOL11Q9H8H0 719 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 COPG2Q9UBF2 871 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 DHCR7Q9UBM7 475 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 RUVBL1Q9Y265 456 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 MRPS2Q9Y399 296 aaKnown RBP12.53□□□□□ -0.4
TMEM258-202ENST00000535042 AP1M2Q9Y6Q5 423 aa12.53□□□□□ -0.4
TMEM258-202ENST00000535042 PCM1Q15154 2024 aa12.52□□□□□ -0.4
TMEM258-202ENST00000535042 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.4
TMEM258-202ENST00000535042 HYKKA2RU49 373 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 STMND1H3BQB6 276 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 CPNE3O75131 537 aaKnown RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 H2AFYO75367 372 aaKnown RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 SUPT7LO94864 414 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 LIPCP11150 499 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 ETV4P43268 484 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 PCBP4P57723 403 aaKnown RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 CYP4F2P78329 520 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 CLN3Q13286 438 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 GRM7Q14831 915 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 PCLAFQ15004 111 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 C1orf189Q5VU69 101 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 ZNF385CQ66K41 422 aaPredicted RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 RHBDD2Q6NTF9 364 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 C6orf15Q6UXA7 325 aaPredicted RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 VN1R5Q7Z5H4 357 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 ASPGQ86U10 573 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 PROSER1Q86XN7 944 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 SLC22A9Q8IVM8 553 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 C10orf107Q8IVU9 208 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 RDH11Q8TC12 318 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 RERGQ96A58 199 aaPredicted RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 CLIP3Q96DZ5 547 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 L3HYPDHQ96EM0 354 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 C10orf90Q96M02 699 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 CDK15Q96Q40 435 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 RUFY1Q96T51 708 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 IQCGQ9H095 443 aaKnown RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 NT5DC2Q9H857 520 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 SSU72Q9NP77 194 aaKnown RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 SEMA4BQ9NPR2 832 aaPredicted RBP12.52□□□□□ -0.41
TMEM258-202ENST00000535042 CUTCQ9NTM9 273 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 ZNF446Q9NWS9 450 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 OXSMQ9NWU1 459 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 ZFP69BQ9UJL9 534 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 RAXQ9Y2V3 346 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 RNF11Q9Y3C5 154 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 ACTL7BQ9Y614 415 aa12.52□□□□□ -0.41
TMEM258-202ENST00000535042 MEN1O00255 615 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 KATNA1O75449 491 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 TBX6O95947 436 aaPredicted RBP12.51□□□□□ -0.41
TMEM258-202ENST00000535042 ITGAXP20702 1163 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 CXCR2P25025 360 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 ALDH3A1P30838 453 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 AHRP35869 848 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
TMEM258-202ENST00000535042 PIK3CGP48736 1102 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 DNAJB13P59910 316 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 MAGOHP61326 146 aaKnown RBP12.51□□□□□ -0.41
TMEM258-202ENST00000535042 CLCQ05315 142 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 HYAL2Q12891 473 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 TRAF3Q13114 568 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 MAP7Q14244 749 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 GRHL2Q6ISB3 625 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 FAM199XQ6PEV8 388 aaPredicted RBP12.51□□□□□ -0.41
TMEM258-202ENST00000535042 TMIGD1Q6UXZ0 262 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 TTLL10Q6ZVT0 673 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM258-202ENST00000535042 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 DSELQ8IZU8 1212 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 NLGN4XQ8N0W4 816 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 KRT78Q8N1N4 520 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 TTC29Q8NA56 475 aaPredicted RBP12.51□□□□□ -0.41
TMEM258-202ENST00000535042 KCT2Q8NC54 265 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 ZNF248Q8NDW4 579 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 NLGN4YQ8NFZ3 816 aaPredicted RBP12.51□□□□□ -0.41
TMEM258-202ENST00000535042 TRPC4APQ8TEL6 797 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 CREB3L4Q8TEY5 395 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 SLC13A3Q8WWT9 602 aa12.51□□□□□ -0.41
TMEM258-202ENST00000535042 LRFN5Q96NI6 719 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms