RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 CLECL1Q8IZS7 167 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 C1orf52Q8N6N3 182 aaKnown RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 GOT1L1Q8NHS2 421 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 MIPOL1Q8TD10 442 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 SH3KBP1Q96B97 665 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 AP2M1Q96CW1 435 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 EPYCQ99645 322 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 BHLHE41Q9C0J9 482 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 RAD21L1Q9H4I0 556 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 EHD1Q9H4M9 534 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 REEP1Q9H902 201 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 CCNB1IP1Q9NPC3 277 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 ATP6V1HQ9UI12 483 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 NDRG4Q9ULP0 352 aaKnown RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 VPS4AQ9UN37 437 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 ERVK-11Q9UQG0 969 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 MGAT4DA6NG13 374 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 ZNF99A8MXY4 864 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 ZNF197O14709 1029 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 PFDN1O60925 122 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 CLPXO76031 633 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 CD247P20963 164 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 IDSP22304 550 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 RPL3P39023 403 aaKnown RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 VEGFBP49765 207 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 VLDLRP98155 873 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 DDX39BQ13838 428 aaKnown RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 FAHD1Q6P587 224 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 Q6ZNX1 250 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 ZC3H7AQ8IWR0 971 aaKnown RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 KIAA1958Q8N8K9 716 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 HUS1BQ8NHY5 278 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 ZFP90Q8TF47 636 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 TANKQ92844 425 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 TCF25Q9BQ70 676 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 EFCAB11Q9BUY7 163 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 FUNDC2Q9BWH2 189 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 ZCCHC2Q9C0B9 1178 aaKnown RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 ADPRHL2Q9NX46 363 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 SCN3BQ9NY72 215 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 FZD4Q9ULV1 537 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 PADI2Q9Y2J8 665 aa18.11■□□□□ 0.49
COPS7A-204ENST00000534947 SAMHD1Q9Y3Z3 626 aaKnown RBP18.11■□□□□ 0.49
COPS7A-204ENST00000534947 E9PQ18 207 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 TMX2-CTNND1H3BSU7 103 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 C9P02748 559 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 RHOP08100 348 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 ZNF12P17014 697 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 ZNF182P17025 639 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 CSNK2BP67870 215 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 BNIP3Q12983 259 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 RGNQ15493 299 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 ZNF765Q7L2R6 523 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 OR10Q1Q8NGQ4 319 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 CYB5D2Q8WUJ1 264 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 SGCDQ92629 289 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 C7orf34Q96L11 122 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 PITX2Q99697 317 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 ATAD3AQ9NVI7 634 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 PAK1IP1Q9NWT1 392 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 WARS2Q9UGM6 360 aaKnown RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 GMPPBQ9Y5P6 360 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 MYO1GB0I1T2 1018 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 H3BM21 787 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 YY2O15391 372 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 NDUFS2O75306 463 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 BDKRB1P46663 353 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 PREPP48147 710 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 CLK3P49761 638 aaKnown RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 SLC35A2P78381 396 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 MVKQ03426 396 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 IQCCQ4KMZ1 466 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 ZNF648Q5T619 568 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 TMEM220Q6QAJ8 160 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 SLC16A12Q6ZSM3 486 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 LAS2Q8IYD9 372 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 MRPL43Q8N983 215 aaKnown RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 TTC29Q8NA56 475 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 C11orf65Q8NCR3 313 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 TRUB1Q8WWH5 349 aaKnown RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 DTD2Q96FN9 168 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 COQ10AQ96MF6 247 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 CSF3RQ99062 836 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 RIBC2Q9H4K1 309 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 PDP1Q9P0J1 537 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-204ENST00000534947 BTBD3Q9Y2F9 522 aa18.1■□□□□ 0.49
COPS7A-204ENST00000534947 SUV39H1O43463 412 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 MITFO75030 526 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-204ENST00000534947 C1orf105O95561 183 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 ETHE1O95571 254 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 ACVR2AP27037 513 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 PAGE2BQ5JRK9 111 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 KIAA1614Q5VZ46 1190 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 CRTC3Q6UUV7 619 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 VTCN1Q7Z7D3 282 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 B3GNT8Q7Z7M8 397 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 SVOPQ8N4V2 548 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.09■□□□□ 0.49
COPS7A-204ENST00000534947 FAR1Q8WVX9 515 aa18.09■□□□□ 0.49
COPS7A-204ENST00000534947 HSPBAP1Q96EW2 488 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms