RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 MAGIXQ9H6Y5 334 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 DMRT3Q9NQL9 472 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 PAPOLBQ9NRJ5 636 aaKnown RBP13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 TM7SF3Q9NS93 570 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 SERGEFQ9UGK8 458 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 UNC80Q8N2C7 3258 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 G3V2T6 193 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 RFXAPO00287 272 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 VILLO15195 856 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 TGFB1P01137 390 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 IDSP22304 550 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 HPCAL1P37235 193 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 CST6Q15828 149 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 ZIK1Q3SY52 487 aaPredicted RBP13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 LRRC23Q53EV4 343 aaPredicted RBP13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 ZDHHC13Q8IUH4 622 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 ZZZ3Q8IYH5 903 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 HS3ST5Q8IZT8 346 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 TRIML2Q8N7C3 387 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 ZNF740Q8NDX6 193 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 DGCR14Q96DF8 476 aaKnown RBP13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 NRTNQ99748 197 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 AASDHPPTQ9NRN7 309 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 CKAP5Q14008 2032 aa13.13□□□□□ -0.31
FOXRED1-218ENST00000534315 FOXE1O00358 373 aaPredicted RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 SAP18O00422 153 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 GNGT2O14610 69 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 KCNK5O95279 499 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 ALBP02768 609 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 GBAP04062 536 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 APODP05090 189 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 GPX2P18283 190 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 GDI1P31150 447 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 VAC14Q08AM6 782 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PPP1R8Q12972 351 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 HIST2H2ACQ16777 129 aaPredicted RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PRAMEF14Q5SWL7 426 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PRAMEF13Q5VWM6 474 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 HIST2H2AA3Q6FI13 130 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 GALNT18Q6P9A2 607 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 USP51Q70EK9 711 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 CAMKMTQ7Z624 323 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PATL1Q86TB9 770 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 LRRTM4Q86VH4 590 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 ZFP28Q8NHY6 868 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 TFGQ92734 400 aaPredicted RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 RAD51AP1Q96B01 352 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PYURFQ96I23 114 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 CDCA3Q99618 268 aaPredicted RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 OR51B5Q9H339 312 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 EXO1Q9UQ84 846 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 TDRKHQ9Y2W6 561 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 CFAP20Q9Y6A4 193 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PI15O43692 258 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 CCNDBP1O95273 360 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 THRBP10828 461 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 IL1RNP18510 177 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 KELP23276 732 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 EIF2DP41214 584 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 SOX9P48436 509 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 RPA4Q13156 261 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 VMACQ2NL98 169 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 SLC30A9Q6PML9 568 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PARM1Q6UWI2 310 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 ABRAXAS1Q6UWZ7 409 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PTOV1Q86YD1 416 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 DCUN1D3Q8IWE4 304 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 GALNT15Q8N3T1 639 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 ZCCHC7Q8N3Z6 543 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 WDR48Q8TAF3 677 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 SNX19Q92543 992 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 FGF14Q92915 247 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 SDCCAG3Q96C92 435 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 NMD3Q96D46 503 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 DPH2Q9BQC3 489 aaPredicted RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 ACAT2Q9BWD1 397 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 RSPH9Q9H1X1 276 aaPredicted RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 SMURF2Q9HAU4 748 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 TPT1P8Q9HAU6 139 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 MBNL1Q9NR56 388 aaKnown RBP13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 SH3BP4Q9P0V3 963 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 BTNL2Q9UIR0 455 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 PCDHB11Q9Y5F2 797 aa13.12□□□□□ -0.31
FOXRED1-218ENST00000534315 A0A1W2PP55 124 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 H0YAE9 185 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 ZNF682O95780 498 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 ALDH3B2P48448 385 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 TUBA4AP68366 448 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 ZNF763Q0D2J5 394 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 GAB1Q13480 694 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 PLCL1Q15111 1095 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 RBBP5Q15291 538 aaKnown RBP13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 C2orf27AQ580R0 203 aa13.11□□□□□ -0.31
FOXRED1-218ENST00000534315 C10orf62Q5T681 223 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms