RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 GSTM2P28161 218 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 CRHR1P34998 444 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 SCTRP47872 440 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 MEF2AQ02078 507 aaPredicted RBP18.91■□□□□ 0.62
CHEK1-215ENST00000533778 IRF8Q02556 426 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 PCDH1Q08174 1060 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 PWP1Q13610 501 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 RBBP5Q15291 538 aaKnown RBP18.91■□□□□ 0.62
CHEK1-215ENST00000533778 TBCCQ15814 346 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 XKR6Q5GH73 641 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 C1orf189Q5VU69 101 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 PRMT9Q6P2P2 845 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 SH2D5Q6ZV89 423 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 VASH2Q86V25 355 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 IQCKQ8N0W5 287 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 TMEM151AQ8N4L1 468 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 TEX9Q8N6V9 391 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 CT55Q8WUE5 264 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 HNRNPLLQ8WVV9 542 aaKnown RBP18.91■□□□□ 0.62
CHEK1-215ENST00000533778 PHF21BQ96EK2 531 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 WDR34Q96EX3 536 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 MVB12AQ96EY5 273 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 SEC16BQ96JE7 1060 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 GBP5Q96PP8 586 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 CHST8Q9H2A9 424 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 NT5DC2Q9H857 520 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 GEMIN8Q9NWZ8 242 aaKnown RBP18.91■□□□□ 0.62
CHEK1-215ENST00000533778 ZFP69BQ9UJL9 534 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 CDC14AQ9UNH5 594 aa18.91■□□□□ 0.62
CHEK1-215ENST00000533778 RUVBL1Q9Y265 456 aaKnown RBP18.91■□□□□ 0.62
CHEK1-215ENST00000533778 ASPMQ8IZT6 3477 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 LCMT2O60294 686 aaKnown RBP18.9■□□□□ 0.62
CHEK1-215ENST00000533778 RAB40ALP0C0E4 278 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 VARSP26640 1264 aaKnown RBP18.9■□□□□ 0.62
CHEK1-215ENST00000533778 CASP2P42575 452 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 MC1RQ01726 317 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 ZNF844Q08AG5 666 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 DNASE1L3Q13609 305 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 HKDC1Q2TB90 917 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 KRT71Q3SY84 523 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 CCDC153Q494R4 210 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 ZNF385CQ66K41 422 aaPredicted RBP18.9■□□□□ 0.62
CHEK1-215ENST00000533778 TMIGD1Q6UXZ0 262 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 VN1R4Q7Z5H5 301 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 SLC22A9Q8IVM8 553 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 TRPV3Q8NET8 790 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 UBE2E3Q969T4 207 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 TM4SF19Q96DZ7 209 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 IQCGQ9H095 443 aaKnown RBP18.9■□□□□ 0.62
CHEK1-215ENST00000533778 GPN3Q9UHW5 284 aaPredicted RBP18.9■□□□□ 0.62
CHEK1-215ENST00000533778 ASB1Q9Y576 335 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 PCDHGA6Q9Y5G7 932 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 WDFY3Q8IZQ1 3526 aa18.9■□□□□ 0.62
CHEK1-215ENST00000533778 APC2O95996 2303 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 IGF2RP11717 2491 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 PRPF4O43172 522 aaKnown RBP eCLIP18.89■□□□□ 0.612e-7■■■■□ 25.5
CHEK1-215ENST00000533778 ATP5F1P24539 256 aaPredicted RBP18.89■□□□□ 0.61
CHEK1-215ENST00000533778 EEF1DP29692 281 aaKnown RBP18.89■□□□□ 0.61
CHEK1-215ENST00000533778 NFKB2Q00653 900 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 SLC18A2Q05940 514 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 RGS1Q08116 209 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 VAC14Q08AM6 782 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 CHIT1Q13231 466 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 GTF2H2Q13888 395 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 FAM53BQ14153 422 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 DOC2AQ14183 400 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 SLBPQ14493 270 aaKnown RBP eCLIP18.89■□□□□ 0.61
CHEK1-215ENST00000533778 NKAIN1Q4KMZ8 207 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 GTF2H2CQ6P1K8 395 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 C16orf46Q6P387 395 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 FAM199XQ6PEV8 388 aaPredicted RBP18.89■□□□□ 0.61
CHEK1-215ENST00000533778 LRIG3Q6UXM1 1119 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 TRABD2AQ86V40 505 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 ZNF740Q8NDX6 193 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 CCDC126Q96EE4 140 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 SLC45A3Q96JT2 553 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 SYNPO2LQ9H987 977 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 SENP1Q9P0U3 644 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 IFT80Q9P2H3 777 aaPredicted RBP18.89■□□□□ 0.61
CHEK1-215ENST00000533778 COPG2Q9UBF2 871 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 FARSAQ9Y285 508 aaKnown RBP18.89■□□□□ 0.61
CHEK1-215ENST00000533778 PADI2Q9Y2J8 665 aa18.89■□□□□ 0.61
CHEK1-215ENST00000533778 TPRP12270 2363 aaKnown RBP18.89■□□□□ 0.61
CHEK1-215ENST00000533778 URADA6NGE7 173 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 FOXO6A8MYZ6 492 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 E2F3O00716 465 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 TERTO14746 1132 aaKnown RBP18.88■□□□□ 0.61
CHEK1-215ENST00000533778 RGS16O15492 202 aaPredicted RBP18.88■□□□□ 0.61
CHEK1-215ENST00000533778 NDUFS4O43181 175 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 EFSO43281 561 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 CTIFO43310 598 aaKnown RBP18.88■□□□□ 0.61
CHEK1-215ENST00000533778 UGDHO60701 494 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 SIX3O95343 332 aaPredicted RBP18.88■□□□□ 0.61
CHEK1-215ENST00000533778 ONECUT2O95948 504 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 SBK3P0C264 359 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 EPORP19235 508 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 PTPN4P29074 926 aa18.88■□□□□ 0.61
CHEK1-215ENST00000533778 HPDP32754 393 aaPredicted RBP18.88■□□□□ 0.61
CHEK1-215ENST00000533778 BEND6Q5SZJ8 279 aaPredicted RBP18.88■□□□□ 0.61
CHEK1-215ENST00000533778 CEP85LQ5SZL2 805 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms