RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NR6A1Q15406 480 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 XKR7Q5GH72 579 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 DUS1LQ6P1R4 473 aaKnown RBP10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 NXPE4Q6UWF7 544 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 LARP4Q71RC2 724 aaKnown RBP eCLIP10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 NAGSQ8N159 534 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 SFRP1Q8N474 314 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 ARL10Q8N8L6 244 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 DCBLD1Q8N8Z6 715 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 FNDC5Q8NAU1 212 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 NETO1Q8TDF5 533 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 RHBDD1Q8TEB9 315 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 USP7Q93009 1102 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 NEIL2Q969S2 332 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 OR52B2Q96RD2 323 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 CENPKQ9BS16 269 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 KRTAP9-9Q9BYP9 154 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 KRTAP9-4Q9BYQ2 154 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 AKTIPQ9H8T0 292 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 NOP53Q9NZM5 478 aaKnown RBP10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 CPNE7Q9UBL6 633 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 CIDEBQ9UHD4 219 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 TAC3Q9UHF0 121 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 ZNF225Q9UK10 706 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 EIF3LQ9Y262 564 aaKnown RBP10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 BTRCQ9Y297 605 aa10.52□□□□□ -0.72
CCDC90B-218ENST00000533761 ARID1BQ8NFD5 2236 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 ASCC3Q8N3C0 2202 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 ATP6AP2A0A1C7CYW4 349 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 FFAR3O14843 346 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 GPR42O15529 346 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 SIGLEC6O43699 453 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 ATP6AP2O75787 350 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 RSL1D1O76021 490 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 UBOX5O94941 541 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 UNC5CO95185 931 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 EML2O95834 649 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 JUNP05412 331 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 ESRRAP11474 423 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 EPORP19235 508 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 PRDX6P30041 224 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 CMPK1P30085 196 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 BNIP1Q12981 228 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 TUBB3Q13509 450 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 DOC2AQ14183 400 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 C14orf28Q4W4Y0 310 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 LACTB2Q53H82 288 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 CACHD1Q5VU97 1274 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 SUSD1Q6UWL2 747 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 SLCO4C1Q6ZQN7 724 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 CHSY3Q70JA7 882 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 NAXDQ8IW45 347 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 LRRC56Q8IYG6 542 aaPredicted RBP10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 CPSF7Q8N684 471 aaKnown RBP10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 GPR156Q8NFN8 814 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 OR6C4Q8NGE1 309 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 FAM122AQ96E09 287 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 APOLD1Q96LR9 279 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 OR4K3Q96R72 315 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 SLC40A1Q9NP59 571 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 TNFRSF12AQ9NP84 129 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 NDE1Q9NXR1 346 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 PLAGL1Q9UM63 463 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 TSC22D4Q9Y3Q8 395 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 MAP4K5Q9Y4K4 846 aa10.52□□□□□ -0.73
CCDC90B-218ENST00000533761 TRBV23OR9-2A0A075B6M9 112 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 NUDT21O43809 227 aaKnown RBP10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 SH3BP5O60239 455 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 NOBOXO60393 691 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 MYO1DO94832 1006 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 THRAP10827 490 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 ACPPP15309 386 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 PIK3CBP42338 1070 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 FASLGP48023 281 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 ACADVLP49748 655 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 DUSP3P51452 185 aaPredicted RBP10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 HHEXQ03014 270 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 EMX2Q04743 252 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 PRDX1Q06830 199 aaKnown RBP10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 ABRAXAS2Q15018 415 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 SF1Q15637 639 aaKnown RBP10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 ZXDCQ2QGD7 858 aaPredicted RBP10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 ICE2Q659A1 982 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 ARMC6Q6NXE6 501 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 FOXR1Q6PIV2 292 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 TMIGD1Q6UXZ0 262 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 OOSP2Q86WS3 158 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 C17orf82Q86X59 251 aaPredicted RBP10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 SLC35F3Q8IY50 421 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 CCDC116Q8IYX3 515 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 MIER2Q8N344 545 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 ARL14Q8N4G2 192 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 ABHD11Q8NFV4 315 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 SLC37A2Q8TED4 501 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 NSL1Q96IY1 281 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 IL17FQ96PD4 163 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 CDC6Q99741 560 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 MENTQ9BUN1 341 aa10.51□□□□□ -0.73
CCDC90B-218ENST00000533761 TUBB1Q9H4B7 451 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms