RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 CCR8P51685 355 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 PRKAA2P54646 552 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 RAB15P59190 212 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 FOXM1Q08050 763 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 MPP2Q14168 576 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 PDK4Q16654 411 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 FRMPD2BQ6IN97 320 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 BPHLQ86WA6 291 aaPredicted RBP12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 RDH11Q8TC12 318 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 NXPE2Q96DL1 559 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 ZBTB26Q9HCK0 441 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 OPTCQ9UBM4 332 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 PCTPQ9UKL6 214 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 SLC12A4Q9UP95 1085 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 PCDHGA7Q9Y5G6 932 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
RPUSD4-208ENST00000533628 KCNE1BA0A087WTH5 132 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 LOC105369274A0A096LPK9 316 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 LOC102723532A0A0G2JNH3 316 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 POLR1CO15160 346 aaPredicted RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 NVLO15381 856 aaKnown RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 LCMT2O60294 686 aaKnown RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 C1GALT1C1LP0DN25 315 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 GNAZP19086 355 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 CD22P20273 847 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 TAC1P20366 129 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 VARSP26640 1264 aaKnown RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 CASP2P42575 452 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 ETV4P43268 484 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 GCGRP47871 477 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 REEP5Q00765 189 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 UNC50Q53HI1 259 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 ZC3H12BQ5HYM0 836 aaKnown RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 ATG9BQ674R7 924 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 GOLGA7Q7Z5G4 137 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 PLD3Q8IV08 490 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 OR4N4Q8N0Y3 316 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 LSMEM2Q8N112 164 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 SNX31Q8N9S9 440 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 ZNF740Q8NDX6 193 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 OR8K5Q8NH50 307 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 ZFYVE21Q9BQ24 234 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 SPRTNQ9H040 489 aaPredicted RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 FOXJ2Q9P0K8 574 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 COPG2Q9UBF2 871 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 RARRES3Q9UL19 164 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 A0A0J9YVX5 310 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 TMEM150CB9EJG8 249 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 MAP3K7O43318 606 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 SRPX2O60687 465 aaPredicted RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 WFS1O76024 890 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 IMPDH1P20839 514 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 RANBP1P43487 201 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 HERVK_113P63132 956 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 MEF2AQ02078 507 aaPredicted RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 GTF2H2Q13888 395 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 PCLAFQ15004 111 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 ZNF678Q5SXM1 525 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 DCAF12Q5T6F0 453 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 AGBL2Q5U5Z8 902 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 GKAP1Q5VSY0 366 aaPredicted RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 GTF2H2CQ6P1K8 395 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 CEACAM20Q6UY09 585 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 TMPRSS11BQ86T26 416 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 L3HYPDHQ96EM0 354 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 MOCOSQ96EN8 888 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 NSUN5Q96P11 429 aaKnown RBP12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 TMEM237Q96Q45 408 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 ERVK-6Q9BXR3 956 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 EHD1Q9H4M9 534 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 DKK4Q9UBT3 224 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 ACSL6Q9UKU0 697 aa12.17□□□□□ -0.46
RPUSD4-208ENST00000533628 TRBC2A0A5B9 178 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 FEZF1A0PJY2 475 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 H0YGG7 62 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 OR7A17O14581 309 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 PRPF4O43172 522 aaKnown RBP eCLIP12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 MYL2P10916 166 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 CPA3P15088 417 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 EPB42P16452 691 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 ZNF28P17035 718 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 RBMS1P29558 406 aaKnown RBP12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 SLC5A2P31639 672 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 BCL6P41182 706 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 DNAJB13P59910 316 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 ARF3P61204 181 aaPredicted RBP12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 CUL3Q13618 768 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 DOC2AQ14183 400 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 TBCCQ15814 346 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 PRAMEF17Q5VTA0 474 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 PWWP2BQ6NUJ5 590 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 RPS27LQ71UM5 84 aaKnown RBP12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 VN1R4Q7Z5H5 301 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 ADCK2Q7Z695 626 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 PPP1R3BQ86XI6 285 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 SLC22A9Q8IVM8 553 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 ARHGEF39Q8N4T4 335 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 CCDC63Q8NA47 563 aa12.16□□□□□ -0.46
RPUSD4-208ENST00000533628 AGAP11Q8TF27 550 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms