RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 G6PDP11413 515 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 ZFP36L2P47974 494 aaKnown RBP17.78■□□□□ 0.44
SMPD1-208ENST00000533123 KRT6CP48668 564 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 ATXN3P54252 364 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-208ENST00000533123 MTTPP55157 894 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 EMX2Q04743 252 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 IL23RQ5VWK5 629 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 BNC2Q6ZN30 1099 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-208ENST00000533123 RNF175Q8N4F7 328 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 RNF148Q8N7C7 305 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 ARL10Q8N8L6 244 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 NUDT8Q8WV74 236 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 ELOVL6Q9H5J4 265 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 FAM86C1Q9NVL1 165 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 NLGN3Q9NZ94 848 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 EP300Q09472 2414 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-208ENST00000533123 LNP1A1A4G5 178 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 SLC28A1O00337 649 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 IL12AP29459 219 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 IRF8Q02556 426 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 IMPG1Q17R60 797 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 TRMT5Q32P41 509 aaKnown RBP17.77■□□□□ 0.44
SMPD1-208ENST00000533123 XKR6Q5GH73 641 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 ADGRF3Q8IZF5 1079 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 OR10G6Q8NH81 332 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 SELENOMQ8WWX9 145 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 ATOH1Q92858 354 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-208ENST00000533123 PPP3R2Q96LZ3 170 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 SLC39A3Q9BRY0 314 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 RNPEPL1Q9HAU8 725 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 SLC52A3Q9NQ40 469 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 PRPF19Q9UMS4 504 aaKnown RBP17.77■□□□□ 0.44
SMPD1-208ENST00000533123 PCDHGA7Q9Y5G6 932 aa17.77■□□□□ 0.44
SMPD1-208ENST00000533123 ASXL3Q9C0F0 2248 aa17.77■□□□□ 0.43
SMPD1-208ENST00000533123 OTOGLQ3ZCN5 2332 aa17.77■□□□□ 0.43
SMPD1-208ENST00000533123 OR6C74A6NCV1 312 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 SLC22A3O75751 556 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 CHRM5P08912 532 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-208ENST00000533123 GNAZP19086 355 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 PEBP1P30086 187 aaKnown RBP17.76■□□□□ 0.43
SMPD1-208ENST00000533123 MRPL19P49406 292 aaKnown RBP17.76■□□□□ 0.43
SMPD1-208ENST00000533123 ACTR3P61158 418 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 PDCD4Q53EL6 469 aaKnown RBP17.76■□□□□ 0.43
SMPD1-208ENST00000533123 CATSPEREQ5SY80 951 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 BLOC1S3Q6QNY0 202 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 RNF165Q6ZSG1 346 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 FAM20CQ8IXL6 584 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 RBM12BQ8IXT5 1001 aaKnown RBP17.76■□□□□ 0.43
SMPD1-208ENST00000533123 OR2A1Q8NGT9 310 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 SETD7Q8WTS6 366 aaKnown RBP17.76■□□□□ 0.43
SMPD1-208ENST00000533123 VPS33AQ96AX1 596 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 SNX6Q9UNH7 406 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 DYRK1BQ9Y463 629 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 SNRNP200O75643 2136 aaKnown RBP17.76■□□□□ 0.43
SMPD1-208ENST00000533123 MSX2P35548 267 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-208ENST00000533123 PSME3P61289 254 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 CEACAM7Q14002 265 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 DOC2AQ14183 400 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 CYP20A1Q6UW02 462 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 LCTLQ6UWM7 567 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 TMPRSS11BQ86T26 416 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 AVL9Q8NBF6 648 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 OR4C6Q8NH72 309 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 PROKR1Q8TCW9 393 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 SLC38A3Q99624 504 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 DUSP23Q9BVJ7 150 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 ACTL8Q9H568 366 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 NDE1Q9NXR1 346 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 LRIT1Q9P2V4 623 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 POMPQ9Y244 141 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 RNF215Q9Y6U7 377 aa17.76■□□□□ 0.43
SMPD1-208ENST00000533123 ISM1B1AKI9 464 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 PRICKLE3O43900 615 aaPredicted RBP17.75■□□□□ 0.43
SMPD1-208ENST00000533123 JUPP14923 745 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 TYRP1P17643 537 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 POLR2CP19387 275 aaPredicted RBP17.75■□□□□ 0.43
SMPD1-208ENST00000533123 RCAN2Q14206 197 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 SF3A2Q15428 464 aaKnown RBP17.75■□□□□ 0.43
SMPD1-208ENST00000533123 PIGGQ5H8A4 983 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 ZCCHC8Q6NZY4 707 aaKnown RBP17.75■□□□□ 0.43
SMPD1-208ENST00000533123 EID2Q8N6I1 236 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 SLC5A11Q8WWX8 675 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 HAUS8Q9BT25 410 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 IL1RL2Q9HB29 575 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 LRTM1Q9HBL6 345 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 GPRC5BQ9NZH0 403 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 MAP10Q9P2G4 905 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 PCDHB11Q9Y5F2 797 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 PIPSLA2A3N6 862 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 ASPDHA6ND91 283 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 ANGPT2O15123 496 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 SIGLEC6O43699 453 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 SEC22BO75396 215 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 SMNDC1O75940 238 aaKnown RBP eCLIP17.75■□□□□ 0.43
SMPD1-208ENST00000533123 RSL1D1O76021 490 aaKnown RBP17.75■□□□□ 0.43
SMPD1-208ENST00000533123 ALPPL2P10696 532 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 VARSP26640 1264 aaKnown RBP17.75■□□□□ 0.43
SMPD1-208ENST00000533123 PTGR1Q14914 329 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 SF1Q15637 639 aaKnown RBP17.75■□□□□ 0.43
SMPD1-208ENST00000533123 C6orf163Q5TEZ5 329 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms