RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 CALML5Q9NZT1 146 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 PCDHB3Q9Y5E6 796 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 C1orf196B1AJZ1 125 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 NRP1O14786 923 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 KLF11O14901 512 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 BCAS1O75363 584 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-234ENST00000532844 EPCAMP16422 314 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 UGT1A6P19224 532 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 UGT1A1P22309 533 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 UGT1A4P22310 534 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 VAMP1P23763 118 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 UGT1A3P35503 534 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 ERVK-21P61565 698 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 JAG1P78504 1218 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 HMGCS1Q01581 520 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 PAFAH1B3Q15102 231 aaKnown RBP7.9□□□□□ -1.14
CTNND1-234ENST00000532844 MBLAC2Q68D91 279 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 VASH1Q7L8A9 365 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-234ENST00000532844 CCDC71Q8IV32 467 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-234ENST00000532844 ARHGAP12Q8IWW6 846 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 ASB15Q8WXK1 588 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 PCBD2Q9H0N5 130 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 TVP23BQ9NYZ1 205 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 GLS2Q9UI32 602 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 PCDHGB5Q9Y5G0 923 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 SLC16A8O95907 504 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 GNAZP19086 355 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 ACVRL1P37023 503 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 PLA2G16P53816 162 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 PRKCZQ05513 592 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 DAG1Q14118 895 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 CDK10Q15131 360 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 SLC30A6Q6NXT4 461 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 TNFAIP8L2Q6P589 184 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-234ENST00000532844 KLHDC10Q6PID8 442 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 SMARCD3Q6STE5 483 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 OSTM1Q86WC4 334 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 ZNF227Q86WZ6 799 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 DDX1Q92499 740 aaKnown RBP7.9□□□□□ -1.14
CTNND1-234ENST00000532844 FUZQ9BT04 418 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 IL36AQ9UHA7 158 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 UBQLN2Q9UHD9 624 aa7.9□□□□□ -1.14
CTNND1-234ENST00000532844 RGPD8O14715 1765 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-234ENST00000532844 ILVBLA1L0T0 632 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 A6NCN8 305 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 H0YGN5 161 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 CCNFP41002 786 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 FNTBP49356 437 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 CLCN4P51793 760 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 CAPZA1P52907 286 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 TARDBPQ13148 414 aaKnown RBP eCLIP7.9□□□□□ -1.151e-8■■■■□ 21.9
CTNND1-234ENST00000532844 RIN1Q13671 783 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 PCLAFQ15004 111 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 RBM48Q5RL73 367 aaKnown RBP7.9□□□□□ -1.15
CTNND1-234ENST00000532844 AKR1C8PQ5T2L2 129 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 ZC3H3Q8IXZ2 948 aaKnown RBP7.9□□□□□ -1.15
CTNND1-234ENST00000532844 SLAIN1Q8ND83 568 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 FAM110BQ8TC76 370 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 CANT1Q8WVQ1 401 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 NUS1Q96E22 293 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 CDKN2AIPNLQ96HQ2 116 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 SUSD3Q96L08 255 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 KCNC2Q96PR1 638 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 OAZ3Q9UMX2 235 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 NFS1Q9Y697 457 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 CPSF4LA6NMK7 179 aaKnown RBP7.9□□□□□ -1.15
CTNND1-234ENST00000532844 EFCAB9A8MZ26 197 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 PITPNM1O00562 1244 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 C8AP07357 584 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 HK1P19367 917 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 NCBP2P52298 156 aaKnown RBP eCLIP7.9□□□□□ -1.158e-20■□□□□ 11.1
CTNND1-234ENST00000532844 ARFRP1Q13795 201 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 DPY19L1Q2PZI1 675 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 SLC2A7Q6PXP3 512 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 DLK2Q6UY11 383 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 SLC30A8Q8IWU4 369 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 PYCR2Q96C36 320 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 SLC7A6OSQ96CW6 309 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-234ENST00000532844 MRPS30Q9NP92 439 aaKnown RBP7.9□□□□□ -1.15
CTNND1-234ENST00000532844 ZDHHC3Q9NYG2 299 aa7.9□□□□□ -1.15
CTNND1-234ENST00000532844 CCDC163A0A0D9SF12 145 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 HYKKA2RU49 373 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 LRRC72A6NJI9 287 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 TSTD3H0UI37 97 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 PAPSS2O95340 614 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-234ENST00000532844 APOC3P02656 99 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 KLHL26Q53HC5 615 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 UBAP2Q5T6F2 1119 aaKnown RBP7.89□□□□□ -1.15
CTNND1-234ENST00000532844 GDF6Q6KF10 455 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-234ENST00000532844 LYSMD3Q7Z3D4 306 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 GOLGA7Q7Z5G4 137 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 IGDCC3Q8IVU1 814 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 PHTF2Q8N3S3 785 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 PQLC3Q8N755 202 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 COQ8BQ96D53 544 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 PKP2Q99959 881 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 LGR4Q9BXB1 951 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 GKN1Q9NS71 199 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 CFL2Q9Y281 166 aa7.89□□□□□ -1.15
CTNND1-234ENST00000532844 BORCS7-ASMTA0A0B4J1R7 106 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms