RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PARP9Q8IXQ6 854 aa18■□□□□ 0.47
SSH3-209ENST00000532600 SNRNP40Q96DI7 357 aaKnown RBP18■□□□□ 0.47
SSH3-209ENST00000532600 PSMG3-AS1Q96PY0 264 aa18■□□□□ 0.47
SSH3-209ENST00000532600 PPANQ9NQ55 473 aaKnown RBP18■□□□□ 0.47
SSH3-209ENST00000532600 TAS2R13Q9NYV9 303 aa18■□□□□ 0.47
SSH3-209ENST00000532600 IKZF3Q9UKT9 509 aa18■□□□□ 0.47
SSH3-209ENST00000532600 VPS4AQ9UN37 437 aa18■□□□□ 0.47
SSH3-209ENST00000532600 NTNG1Q9Y2I2 539 aa18■□□□□ 0.47
SSH3-209ENST00000532600 SPTAN1Q13813 2472 aaKnown RBP17.99■□□□□ 0.47
SSH3-209ENST00000532600 A0A0A6YYC8 382 aaPredicted RBP17.99■□□□□ 0.47
SSH3-209ENST00000532600 I3L1I5 382 aaPredicted RBP17.99■□□□□ 0.47
SSH3-209ENST00000532600 ALPPP05187 535 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 RNF224P0DH78 156 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 OCA2Q04671 838 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 KIAA0408Q6ZU52 694 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 GALNT7Q86SF2 657 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 MVB12AQ96EY5 273 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 LINGO1Q96FE5 620 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 OLFM1Q99784 485 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 MACROD1Q9BQ69 325 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 TXLNGYQ9BZA5 131 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 ATG10Q9H0Y0 220 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 CDC42EP4Q9H3Q1 356 aaKnown RBP17.99■□□□□ 0.47
SSH3-209ENST00000532600 CCDC177Q9NQR7 707 aaPredicted RBP17.99■□□□□ 0.47
SSH3-209ENST00000532600 ASF1BQ9NVP2 202 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 TRPC4Q9UBN4 977 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 C3orf18Q9UK00 162 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 PCDHGA10Q9Y5H3 936 aa17.99■□□□□ 0.47
SSH3-209ENST00000532600 A0A1W2PQ72 361 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 FAM159BA6NKW6 160 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 SEMA7AO75326 666 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 C8GP07360 202 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 COX6A1P12074 109 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 FDXRP22570 491 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 TNFRSF8P28908 595 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 CSNK1G2P78368 415 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 EFTUD2Q15029 972 aaKnown RBP eCLIP17.98■□□□□ 0.478e-8■■■■■ 33.2
SSH3-209ENST00000532600 THEMIS2Q5TEJ8 643 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 GARNL3Q5VVW2 1013 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 UGT3A1Q6NUS8 523 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 AGTRAPQ6RW13 159 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 PRSS41Q7RTY9 318 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 ADCK2Q7Z695 626 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 ZC3H7AQ8IWR0 971 aaKnown RBP17.98■□□□□ 0.47
SSH3-209ENST00000532600 CISD2Q8N5K1 135 aaKnown RBP17.98■□□□□ 0.47
SSH3-209ENST00000532600 MMABQ96EY8 250 aaPredicted RBP17.98■□□□□ 0.47
SSH3-209ENST00000532600 CCDC138Q96M89 665 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 MCMBPQ9BTE3 642 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 SGPP1Q9BX95 441 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 PARVBQ9HBI1 364 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 ZNF160Q9HCG1 818 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 TMEM184CQ9NVA4 438 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 NAV2Q8IVL1 2488 aa17.98■□□□□ 0.47
SSH3-209ENST00000532600 BLACEA4D250 179 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 IDSB3KWA1 339 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 SLC16A5O15375 505 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 LCMT2O60294 686 aaKnown RBP17.97■□□□□ 0.47
SSH3-209ENST00000532600 IPO13O94829 963 aaKnown RBP17.97■□□□□ 0.47
SSH3-209ENST00000532600 HPP00738 406 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 GSTA2P09210 222 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 ACPPP15309 386 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 BCL6P41182 706 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 VSNL1P62760 191 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 MAT1AQ00266 395 aaKnown RBP17.97■□□□□ 0.47
SSH3-209ENST00000532600 SP140Q13342 867 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
SSH3-209ENST00000532600 ERCC6LQ2NKX8 1250 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 HECTD2Q5U5R9 776 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 LRRC8EQ6NSJ5 796 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 TMEM207Q6UWW9 146 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 CYS1Q717R9 158 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 IQCKQ8N0W5 287 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 ZADH2Q8N4Q0 377 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 MCOLN3Q8TDD5 553 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 FBF1Q8TES7 1133 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 RERGQ96A58 199 aaPredicted RBP17.97■□□□□ 0.47
SSH3-209ENST00000532600 TM4SF19Q96DZ7 209 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 THOC3Q96J01 351 aaKnown RBP17.97■□□□□ 0.47
SSH3-209ENST00000532600 BARD1Q99728 777 aaKnown RBP17.97■□□□□ 0.47
SSH3-209ENST00000532600 TGIF2Q9GZN2 237 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 LHPPQ9H008 270 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 DRC3Q9H069 523 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 CDC14AQ9UNH5 594 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 HIVEP3Q5T1R4 2406 aa17.97■□□□□ 0.47
SSH3-209ENST00000532600 ESPL1Q14674 2120 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 KCNE1BA0A087WTH5 132 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 FEZF1A0PJY2 475 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 JRKO75564 520 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 KLHL18O94889 574 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 CELA2AP08217 269 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 NPPBP16860 134 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 RGS4P49798 205 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 EMP2P54851 167 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 NAE1Q13564 534 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 FAM53BQ14153 422 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 AGAP7PQ5VUJ5 663 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 MYO1HQ8N1T3 1032 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 EIF1ADQ8N9N8 165 aaKnown RBP17.96■□□□□ 0.47
SSH3-209ENST00000532600 OR9A4Q8NGU2 314 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 PSMF1Q92530 271 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms