RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 TRBC2A0A5B9 178 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 SLCO1B7G3V0H7 640 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 GP1BAP07359 652 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 ARL4DP49703 201 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 SQSTM1Q13501 440 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 SPIDRQ14159 915 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 NAA25Q14CX7 972 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 KIRREL3Q8IZU9 778 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 TBC1D19Q8N5T2 526 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 ANKRD53Q8N9V6 530 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 HUS1BQ8NHY5 278 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 ANKMY1Q9P2S6 941 aa18.25■□□□□ 0.51
SMPD1-205ENST00000531303 GOLGA8QA0A0J9YX86 632 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 ATP6AP2A0A1C7CYW4 349 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 GOLGA8OA6NCC3 632 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 ANKDD1BA6NHY2 528 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 GOLGA8NF8WBI6 632 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 DIAPH2O60879 1101 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 ATP6AP2O75787 350 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 TGDSO95455 350 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 SCTRP47872 440 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 KCNAB1Q14722 419 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 TRIP6Q15654 476 aaKnown RBP18.24■□□□□ 0.51
SMPD1-205ENST00000531303 DEFB110Q30KQ9 67 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 PHF19Q5T6S3 580 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 LAS2Q8IYD9 372 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 WDR20Q8TBZ3 569 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 C19orf60Q96EN9 201 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 C3orf30Q96M34 536 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 MACROD1Q9BQ69 325 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 WDR55Q9H6Y2 383 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-205ENST00000531303 SYNPO2LQ9H987 977 aa18.24■□□□□ 0.51
SMPD1-205ENST00000531303 IGHV5-10-1A0A0J9YXX1 117 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 ZNF195O14628 629 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 ZBTB11O95625 1053 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-205ENST00000531303 SPTBP11277 2137 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 EZRP15311 586 aaKnown RBP18.23■□□□□ 0.51
SMPD1-205ENST00000531303 MLLT3P42568 568 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-205ENST00000531303 RPS15AP62244 130 aaKnown RBP18.23■□□□□ 0.51
SMPD1-205ENST00000531303 HMGCS1Q01581 520 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 SLC9B1Q4ZJI4 515 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 VN1R5Q7Z5H4 357 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 MFSD9Q8NBP5 474 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 RCBTB1Q8NDN9 531 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 OR4D9Q8NGE8 314 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 USP7Q93009 1102 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 TCTN2Q96GX1 697 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 CCDC74BQ96LY2 380 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 NT5DC2Q9H857 520 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 PILRAQ9UKJ1 303 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 KLK4Q9Y5K2 254 aa18.23■□□□□ 0.51
SMPD1-205ENST00000531303 LOC105369274A0A096LPK9 316 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 LOC102723532A0A0G2JNH3 316 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 TRPC5OSA6NMA1 111 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 SRRM3A6NNA2 597 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-205ENST00000531303 MAGEB17A8MXT2 336 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 D6RAR5 112 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 NTN3O00634 580 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-205ENST00000531303 MAP3K7O43318 606 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 HCRTR1O43613 425 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 RFPL3O75679 317 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 TGFB1P01137 390 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 EIF2S1P05198 315 aaKnown RBP18.22■□□□□ 0.51
SMPD1-205ENST00000531303 HK2P52789 917 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 LIMK1P53667 647 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 RPS13P62277 151 aaKnown RBP18.22■□□□□ 0.51
SMPD1-205ENST00000531303 PHEXP78562 749 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 COL9A2Q14055 689 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-205ENST00000531303 IMPG1Q17R60 797 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 FRMPD2BQ6IN97 320 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 SPATA21Q7Z572 469 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 PRSS42Q7Z5A4 293 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 OR4N4Q8N0Y3 316 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 DPYSL5Q9BPU6 564 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 ZFYVE21Q9BQ24 234 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 EBF4Q9BQW3 602 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 TMEM120AQ9BXJ8 343 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 PITHD1Q9GZP4 211 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-205ENST00000531303 KCNK13Q9HB14 408 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 PDE7BQ9NP56 450 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 GIMAP2Q9UG22 337 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 PCDHGA4Q9Y5G9 962 aa18.22■□□□□ 0.51
SMPD1-205ENST00000531303 H0YGG7 62 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 SDHDO14521 159 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 THRAP10827 490 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 EPHA3P29320 983 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 IDH3AP50213 366 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 ARFIP2P53365 341 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 VSX2P58304 361 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-205ENST00000531303 ARF3P61204 181 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-205ENST00000531303 HSD11B2P80365 405 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 NXNQ6DKJ4 435 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 EPGNQ6UW88 154 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 B3GNT8Q7Z7M8 397 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 MCATQ8IVS2 390 aaKnown RBP18.21■□□□□ 0.51
SMPD1-205ENST00000531303 OR2T11Q8NH01 316 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 ZNF473Q8WTR7 871 aaKnown RBP18.21■□□□□ 0.51
SMPD1-205ENST00000531303 RERGQ96A58 199 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-205ENST00000531303 TUBGCP3Q96CW5 907 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 OR2A5Q96R48 311 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms