RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 LILRA3Q8N6C8 439 aaPredicted RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 CELF5Q8N6W0 485 aaKnown RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 SP7Q8TDD2 431 aaPredicted RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 NEIL2Q969S2 332 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 PAWRQ96IZ0 340 aaKnown RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ZSWIM3Q96MP5 696 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 NODALQ96S42 347 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 BHLHE41Q9C0J9 482 aaPredicted RBP16.6■□□□□ 0.25
BRCA2-204ENST00000530893 LHPPQ9H008 270 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 CHST8Q9H2A9 424 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 ITM2CQ9NQX7 267 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 VNN3Q9NY84 501 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 FZD4Q9ULV1 537 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 VPS4AQ9UN37 437 aa16.6■□□□□ 0.25
BRCA2-204ENST00000530893 A0A1W2PPW3 197 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 ADH1CP00326 375 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 ADH5P11766 374 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 PDHA2P29803 388 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 RPL3P39023 403 aaKnown RBP16.59■□□□□ 0.25
BRCA2-204ENST00000530893 NFATC3Q12968 1075 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 CDK5R2Q13319 367 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 GTF2H3Q13889 308 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 FGD3Q5JSP0 725 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 ANKRD34AQ69YU3 496 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 LAIR2Q6ISS4 152 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 CYP4Z1Q86W10 505 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 LAS2Q8IYD9 372 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 CDC26Q8NHZ8 85 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 ZFP90Q8TF47 636 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF480Q8WV37 535 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 POF1BQ8WVV4 589 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 EZH1Q92800 747 aaPredicted RBP16.59■□□□□ 0.25
BRCA2-204ENST00000530893 HSH2DQ96JZ2 352 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 LINC00615Q96LM1 132 aaPredicted RBP16.59■□□□□ 0.25
BRCA2-204ENST00000530893 MTG2Q9H4K7 406 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 ATAD3AQ9NVI7 634 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 ATP6V1HQ9UI12 483 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 PSME2Q9UL46 239 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 BTBD3Q9Y2F9 522 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 DYRK1BQ9Y463 629 aa16.59■□□□□ 0.25
BRCA2-204ENST00000530893 HEMK1Q9Y5R4 338 aaPredicted RBP16.59■□□□□ 0.25
BRCA2-204ENST00000530893 C17orf113A0A1B0GUU1 675 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 GNG14A0A1W2PPG7 69 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 KPNA3O00505 521 aaPredicted RBP16.58■□□□□ 0.25
BRCA2-204ENST00000530893 YY2O15391 372 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 FKBP9O95302 570 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 CYP17A1P05093 508 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 HTR1AP08908 422 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 POU2F2P09086 479 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 ITGB7P26010 798 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 WEE1P30291 646 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 CTNNB1P35222 781 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 STT3AP46977 705 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 TBPL1P62380 186 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 UBE3AQ05086 875 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 TMIEQ8NEW7 156 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 OR10Q1Q8NGQ4 319 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 GOT1L1Q8NHS2 421 aaPredicted RBP16.58■□□□□ 0.25
BRCA2-204ENST00000530893 B4GALNT2Q8NHY0 566 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 MUL1Q969V5 352 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 RAD9AQ99638 391 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 APOL4Q9BPW4 351 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 SGPP1Q9BX95 441 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 NAA50Q9GZZ1 169 aaKnown RBP16.58■□□□□ 0.25
BRCA2-204ENST00000530893 REEP1Q9H902 201 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 LTB4R2Q9NPC1 389 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 ADPRHL2Q9NX46 363 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 GULP1Q9UBP9 304 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 HCFC2Q9Y5Z7 792 aa16.58■□□□□ 0.25
BRCA2-204ENST00000530893 PCDH7O60245 1069 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 LILRB5O75023 590 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 FGBP02675 491 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 JUNDP17535 347 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 PCGF2P35227 344 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 GJA8P48165 433 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 DAPP51397 102 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 PLA2G16P53816 162 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 RPS13P62277 151 aaKnown RBP16.58■□□□□ 0.24
BRCA2-204ENST00000530893 VLDLRP98155 873 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 IL5RAQ01344 420 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 ZNF763Q0D2J5 394 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 RAPSNQ13702 412 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 RGNQ15493 299 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 HIST2H2ACQ16777 129 aaPredicted RBP16.58■□□□□ 0.24
BRCA2-204ENST00000530893 HKDC1Q2TB90 917 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 ZNF829Q3KNS6 432 aaPredicted RBP16.58■□□□□ 0.24
BRCA2-204ENST00000530893 HIST2H2AA3Q6FI13 130 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 CEP68Q76N32 757 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 TMPRSS11BQ86T26 416 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 SYTL1Q8IYJ3 562 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 FAM81AQ8TBF8 368 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 SPPL3Q8TCT6 385 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 BCL7BQ9BQE9 202 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 REEP4Q9H6H4 257 aa16.58■□□□□ 0.24
BRCA2-204ENST00000530893 KLHL33A6NCF5 533 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 MYO1GB0I1T2 1018 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 MRPS14O60783 128 aaKnown RBP16.57■□□□□ 0.24
BRCA2-204ENST00000530893 ANGPTL1O95841 491 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 SOD1P00441 154 aa16.57■□□□□ 0.24
BRCA2-204ENST00000530893 C1GALT1C1LP0DN25 315 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms