RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 OTX2P32243 289 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 DUTP33316 252 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PTGER3P43115 390 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MAGEA11P43364 429 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 AMTP48728 403 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PTH2RP49190 550 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 NR0B1P51843 470 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 DMPKQ09013 629 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 SLC10A2Q12908 348 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 IL24Q13007 206 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNF234Q14588 700 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PHKG1Q16816 387 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ODF4Q2M2E3 257 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ITPRIPL2Q3MIP1 535 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ZC2HC1CQ53FD0 456 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MANEAQ5SRI9 462 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 C10orf25Q5T742 122 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 NDUFAF5Q5TEU4 345 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 OR4A47Q6IF82 309 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TRNP1Q6NT89 227 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 FAM159AQ6UWV7 190 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 RAD9BQ6WBX8 426 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 CCNI2Q6ZMN8 369 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 SPRED1Q7Z699 444 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PRUNE1Q86TP1 453 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 GPALPP1Q8IXQ4 340 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 CRYBG2Q8N1P7 616 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 BCORP1Q8N888 145 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 OR11H4Q8NGC9 324 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 OR10T2Q8NGX3 314 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MPLKIPQ8TAP9 179 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 RNF139Q8WU17 664 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 UBTD2Q8WUN7 234 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 CTNNBL1Q8WYA6 563 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 WASF1Q92558 559 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 FCGR1BQ92637 280 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 LGALS12Q96DT0 336 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM19Q96HH6 336 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 OXNAD1Q96HP4 312 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 GPR137Q96N19 417 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 SLC25A33Q9BSK2 321 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ALKBH7Q9BT30 221 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ZSCAN5AQ9BUG6 496 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 QTRT1Q9BXR0 403 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PUS3Q9BZE2 481 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TRIM6Q9C030 488 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MIS12Q9H081 205 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TLE6Q9H808 572 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 VPS37BQ9H9H4 285 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 ROPN1Q9HAT0 212 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 VAT1LQ9HCJ6 419 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TM9SF3Q9HD45 589 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 FARSBQ9NSD9 589 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PANK4Q9NVE7 773 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 SMPD3Q9NY59 655 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TUBA8Q9NY65 449 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 SPHK1Q9NYA1 384 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PTTG2Q9NZH5 202 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 PSORS1C1Q9UIG5 152 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TNNQ9UQP3 1299 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MRPS2Q9Y399 296 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 TMED7Q9Y3B3 224 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 INSL6Q9Y581 213 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 MAB21L2Q9Y586 359 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 DDX49Q9Y6V7 483 aaKnown RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 COL11A2P13942 1736 aaPredicted RBP3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 CC2D2AQ9P2K1 1620 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 SMARCA2P51531 1590 aa3.29□□□□□ -1.88
AMBRA1-208ENST00000529558 A0A087X1B8 175 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 A0A0G2JNG1 304 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 A0A0U1RQJ8 604 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 A0A1W2PRB8 838 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TMEM89A2RUT3 159 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ANTXRLA6NF34 631 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 MANSC4A6NHS7 340 aaPredicted RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 E5RJQ4 531 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 C1QTNF3-AMACRE9PGA6 284 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 NPIPB8E9PQR5 432 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 SLC22A2O15244 555 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 MAPK13O15264 365 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 MID1O15344 667 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ADAM12O43184 909 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ZNHIT1O43257 154 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 GRID2O43424 1007 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 RGS14O43566 566 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 SPRY3O43610 288 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TLX2O43763 284 aaPredicted RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 NUDT21O43809 227 aaKnown RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 GPRIN2O60269 458 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 LRP3O75074 770 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 MTX2O75431 263 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 CLDN14O95500 239 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 RAF1P04049 648 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 SFTPBP07988 381 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 ZCCHC18P0CG32 403 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 IGHV4-30-4P0DP06 118 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 RALAP11233 206 aa3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 TOP1P11387 765 aaKnown RBP3.28□□□□□ -1.88
AMBRA1-208ENST00000529558 F3P13726 295 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms