RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 SMAD6O43541 496 aaKnown RBP12.59□□□□□ -0.39
RBM39-243ENST00000528062 DNAJB5O75953 348 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 SLC25A14O95258 325 aaPredicted RBP12.59□□□□□ -0.39
RBM39-243ENST00000528062 PRAMEF1O95521 474 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 BMP4P12644 408 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 IGFBP5P24593 272 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 TACR1P25103 407 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 HMGCLP35914 325 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 MAGEA2P43356 314 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 DAPP51397 102 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 MAD2L1Q13257 205 aaPredicted RBP12.59□□□□□ -0.39
RBM39-243ENST00000528062 SMN1Q16637 294 aaKnown RBP12.59□□□□□ -0.39
RBM39-243ENST00000528062 LRIF1Q5T3J3 769 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 TMEM236Q5W0B7 351 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 SHQ1Q6PI26 577 aaKnown RBP12.59□□□□□ -0.39
RBM39-243ENST00000528062 HIPK1Q86Z02 1210 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 SLC22A15Q8IZD6 547 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 PIK3C3Q8NEB9 887 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 USP7Q93009 1102 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 YIPF6Q96EC8 236 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 MYOCQ99972 504 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 FAM126AQ9BYI3 521 aaPredicted RBP12.59□□□□□ -0.39
RBM39-243ENST00000528062 RIBC2Q9H4K1 309 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 HMG20AQ9NP66 347 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 ASIC5Q9NY37 505 aa12.59□□□□□ -0.39
RBM39-243ENST00000528062 GLULP15104 373 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 EPORP19235 508 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 EPHA2P29317 976 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 KIR2DL1P43626 348 aaPredicted RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 SLC35A2P78381 396 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 IL18R1Q13478 541 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 CCINQ13939 588 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 ACOX1Q15067 660 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 NPTX1Q15818 432 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 SMU1Q2TAY7 513 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 GALNT10Q86SR1 603 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 GALNT13Q8IUC8 556 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 ZDHHC21Q8IVQ6 265 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 ZNF557Q8N988 423 aaPredicted RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 ZNF641Q96N77 438 aaPredicted RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 DUSP21Q9H596 190 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 WNT16Q9UBV4 365 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 SLCO3A1Q9UIG8 710 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 PPT2Q9UMR5 302 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 FCF1Q9Y324 198 aaKnown RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 COQ9O75208 318 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 DIRAS1O95057 198 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 NADKO95544 446 aaPredicted RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 MT-ND2P03891 347 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 SRCP12931 536 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 TGFBR1P36897 503 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 NCS1P62166 190 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 FZD5Q13467 585 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 DGCR6Q14129 220 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 DMC1Q14565 340 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 RNF165Q6ZSG1 346 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 CADM3Q8N126 398 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 CHCHD4Q8N4Q1 142 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 OR6K2Q8NGY2 324 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 WFIKKN2Q8TEU8 576 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 FAM3CQ92520 227 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 RORBQ92753 470 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 REXO5Q96IC2 774 aaKnown RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 ZNF300Q96RE9 604 aaPredicted RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 NTMT1Q9BV86 223 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 C2orf49Q9BVC5 232 aaPredicted RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 WDR12Q9GZL7 423 aaKnown RBP12.58□□□□□ -0.4
RBM39-243ENST00000528062 KCNH6Q9H252 994 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 GPRC5BQ9NZH0 403 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 TRPS1Q9UHF7 1281 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 HS3ST2Q9Y278 367 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 MAN2B2Q9Y2E5 1009 aa12.58□□□□□ -0.4
RBM39-243ENST00000528062 A0A096LPI6 279 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 TBC1D3BA6NDS4 549 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 ERN1O75460 977 aaKnown RBP12.57□□□□□ -0.4
RBM39-243ENST00000528062 WDR47O94967 919 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 EBLN1P0CF75 366 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 ZNF7P17097 686 aaPredicted RBP12.57□□□□□ -0.4
RBM39-243ENST00000528062 JUNDP17535 347 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 IL1RNP18510 177 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 RPS3P23396 243 aaKnown RBP eCLIP12.57□□□□□ -0.4
RBM39-243ENST00000528062 RPS14P62263 151 aaKnown RBP12.57□□□□□ -0.4
RBM39-243ENST00000528062 IL1RL1Q01638 556 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 DNASE1L3Q13609 305 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 CPSF6Q16630 551 aaKnown RBP eCLIP12.57□□□□□ -0.4
RBM39-243ENST00000528062 RFX4Q33E94 735 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 PAGE2BQ5JRK9 111 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 GPRC6AQ5T6X5 926 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 CERS6Q6ZMG9 384 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 CCDC81Q6ZN84 652 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 UBALD2Q8IYN6 164 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 DYNC2LI1Q8TCX1 351 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 UBTD2Q8WUN7 234 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 GLMNQ92990 594 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 TSSK3Q96PN8 268 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 ASB8Q9H765 288 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 ERVW-1Q9UQF0 538 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 ORC6Q9Y5N6 252 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 WASH3PC4AMC7 463 aa12.57□□□□□ -0.4
RBM39-243ENST00000528062 SLC22A1O15245 554 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms