RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 HGDQ93099 445 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 POP5Q969H6 163 aaKnown RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 SLC22A18Q96BI1 424 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 CCDC126Q96EE4 140 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 RNF31Q96EP0 1072 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 TRMT61AQ96FX7 289 aaKnown RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 ZNF668Q96K58 619 aaPredicted RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 RBP7Q96R05 134 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 SERINC2Q96SA4 455 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 MBOAT4Q96T53 435 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 OSMRQ99650 979 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 APOL2Q9BQE5 337 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 DPCDQ9BVM2 203 aaPredicted RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 C11orf54Q9H0W9 315 aaPredicted RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 RNF208Q9H0X6 261 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 ABCG8Q9H221 673 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 SMOC2Q9H3U7 446 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 ANKRD19PQ9H560 264 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 SOX17Q9H6I2 414 aaPredicted RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 WDR55Q9H6Y2 383 aaPredicted RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 NT5DC2Q9H857 520 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 CRLF2Q9HC73 371 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 ZBTB20Q9HC78 741 aaPredicted RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 SPON1Q9HCB6 807 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 TMEM8AQ9HCN3 771 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 CHMP1AQ9HD42 196 aaPredicted RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 OLA1Q9NTK5 396 aaKnown RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 IMP3Q9NV31 184 aaKnown RBP5.64□□□□□ -1.51
CD44-225ENST00000527326 ERVK13-1Q9NX77 482 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 BTG4Q9NY30 223 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 TREM2Q9NZC2 230 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 SH3BP4Q9P0V3 963 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 SEC14L4Q9UDX3 406 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 STUB1Q9UNE7 303 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 PRKAB1Q9Y478 270 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 PCDHA11Q9Y5I1 949 aa5.64□□□□□ -1.51
CD44-225ENST00000527326 SBF2Q86WG5 1849 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 CCDC163A0A0D9SF12 145 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 GLYATL1P3A0A0U1RQE8 302 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 LOC100130705A0A1B0GUX0 176 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 A0A1W2PP18 115 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 A0A1W2PP55 124 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TCRBV7S3A2A0A539 114 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 OR6C74A6NCV1 312 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ACOD1A6NK06 481 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ASB14A6NK59 587 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 RHPN2P1A8MT19 583 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 MINDY4BA8MYZ0 360 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 WWP2O00308 870 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 PRMT5O14744 637 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 TPP1O14773 563 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 BCKDKO14874 412 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TO15178 435 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 PAGE1O75459 146 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 POP7O75817 140 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 LRIG2O94898 1065 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 IFNA10P01566 189 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 CRYABP02511 175 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 PRKCGP05129 697 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 MPOP05164 745 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 COX5BP10606 129 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ANXA3P12429 323 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 UNGP13051 313 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 HNRNPLP14866 589 aaKnown RBP eCLIP5.63□□□□□ -1.51
CD44-225ENST00000527326 CSF2RAP15509 400 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ARSBP15848 533 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 RAB3BP20337 219 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 EFNA1P20827 205 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 AGXTP21549 392 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TNFSF8P32971 234 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 LIPAP38571 399 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 MAGEA12P43365 314 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 MAP2K4P45985 399 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 NRIP1P48552 1158 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TGM4P49221 684 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 CTSWP56202 376 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ERVK-25P63136 954 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ABATP80404 500 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 SLC3A1Q07837 685 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 GPR17Q13304 367 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 MAMLD1Q13495 774 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 SNTB1Q13884 538 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 DGCR6Q14129 220 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 KEAP1Q14145 624 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TFDP2Q14188 446 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 FGFBP1Q14512 234 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 PRPSAP1Q14558 356 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 USP10Q14694 798 aaKnown RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 TBCEQ15813 527 aaPredicted RBP5.63□□□□□ -1.51
CD44-225ENST00000527326 CHRNA6Q15825 494 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 STXBP2Q15833 593 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ATP13A5Q4VNC0 1218 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 AGKQ53H12 422 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 XKR3Q5GH77 459 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 OR2B11Q5JQS5 317 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 KRBOX4Q5JUW0 171 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 STEAP4Q687X5 459 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 TPGS2Q68CL5 300 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 IL31Q6EBC2 164 aa5.63□□□□□ -1.51
CD44-225ENST00000527326 ZNF470Q6ECI4 717 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms