RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 HAUS8Q9BT25 410 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 ACAT2Q9BWD1 397 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 ATG10Q9H0Y0 220 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 ALG9Q9H6U8 611 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 IGSF5Q9NSI5 407 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 GPR83Q9NYM4 423 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 WWOXQ9NZC7 414 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 NUDT4Q9NZJ9 180 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 LUZP4Q9P127 313 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 SERTAD3Q9UJW9 196 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 PCDHGB7Q9Y5F8 929 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 FER1L5A0AVI2 2057 aa9.7□□□□□ -0.86
VPS28-204ENST00000526054 NCF1BA6NI72 391 aaPredicted RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 SMIM23A6NLE4 172 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 SYCE1LA8MT33 242 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 NCF1CA8MVU1 366 aaPredicted RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 SUPT3HB4E1H0 165 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 CDH16O75309 829 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 SUPT3HO75486 399 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 IPO13O94829 963 aaKnown RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 HBQ1P09105 142 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 NCF1P14598 390 aaPredicted RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 AGXTP21549 392 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 HRH2P25021 359 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 GMPRP36959 345 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 GRIA3P42263 894 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 SLCO1A2P46721 670 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 PRDX1Q06830 199 aaKnown RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 ATP1A4Q13733 1029 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 MDC1Q14676 2089 aaKnown RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 ACAP2Q15057 778 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 RASA2Q15283 850 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 TGFBIQ15582 683 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 OR4D1Q15615 310 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 C4orf17Q53FE4 359 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 PRR30Q53SZ7 412 aaPredicted RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 ZC3H12BQ5HYM0 836 aaKnown RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 SULT1C3Q6IMI6 304 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 JMJD6Q6NYC1 403 aaPredicted RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 LCTLQ6UWM7 567 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 TIFABQ6ZNK6 161 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 CDHR3Q6ZTQ4 885 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 MED25Q71SY5 747 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 ISCA2Q86U28 154 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 C17orf64Q86WR6 236 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 HPS6Q86YV9 775 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 FAM20CQ8IXL6 584 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 GPR135Q8IZ08 494 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 RIBC1Q8N443 379 aaPredicted RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 PDPRQ8NCN5 879 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 RHEBL1Q8TAI7 183 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 EPS8L3Q8TE67 593 aaKnown RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 SSC4DQ8WTU2 575 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 PCSK5Q92824 1860 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 EXT2Q93063 718 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 DPH2Q9BQC3 489 aaPredicted RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 DPH7Q9BTV6 452 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 NUDT9Q9BW91 350 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 SGPP1Q9BX95 441 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 SLC29A3Q9BZD2 475 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 CNOT10Q9H9A5 744 aaKnown RBP9.69□□□□□ -0.86
VPS28-204ENST00000526054 SLAMF7Q9NQ25 335 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 IRAK4Q9NWZ3 460 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 CD274Q9NZQ7 290 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 MAP10Q9P2G4 905 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 TBK1Q9UHD2 729 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 PLCL2Q9UPR0 1127 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 KLHL20Q9Y2M5 609 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 DYRK1BQ9Y463 629 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 MAP4K5Q9Y4K4 846 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 KLK4Q9Y5K2 254 aa9.69□□□□□ -0.86
VPS28-204ENST00000526054 RP1L1Q8IWN7 2480 aaPredicted RBP9.68□□□□□ -0.86
VPS28-204ENST00000526054 NUP210LQ5VU65 1888 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 TEX15Q9BXT5 2789 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 A6NL46 340 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 ZNF749O43361 778 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 CAPN1P07384 714 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 RBP1P09455 135 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 KRT15P19012 456 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 OTX2P32243 289 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 GLRBP48167 497 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 RAPSNQ13702 412 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 INPP5JQ15735 1006 aaPredicted RBP9.68□□□□□ -0.86
VPS28-204ENST00000526054 ZIC1Q15915 447 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 DEFB110Q30KQ9 67 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 SLC6A19Q695T7 634 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 FCRL6Q6DN72 434 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 ADCK2Q7Z695 626 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 MRGPREQ86SM8 312 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 LCA5Q86VQ0 697 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 DNAJC22Q8N4W6 341 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 Q8NA96 180 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 ACMSDQ8TDX5 336 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 PNPLA2Q96AD5 504 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 PYCR2Q96C36 320 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 RHBDF1Q96CC6 855 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 SCYL1Q96KG9 808 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 ATOH8Q96SQ7 321 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 C17orf62Q9BQA9 187 aa9.68□□□□□ -0.86
VPS28-204ENST00000526054 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms