RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 OR1C1Q15619 314 aa24.48■■□□□ 1.51
PVT1-219ENST00000523427 PLAG1Q6DJT9 500 aa24.48■■□□□ 1.51
PVT1-219ENST00000523427 SLC13A5Q86YT5 568 aaPredicted RBP24.48■■□□□ 1.51
PVT1-219ENST00000523427 MEMO1Q9Y316 297 aa24.48■■□□□ 1.51
PVT1-219ENST00000523427 CAPN6Q9Y6Q1 641 aa24.48■■□□□ 1.51
PVT1-219ENST00000523427 ZNF839A8K0R7 811 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 E7ENX8 843 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 H3BMM5 538 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 SGK494L7N484 410 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 PFDN6O15212 129 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 MAN1A2O60476 641 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 ESR1P03372 595 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 IL1RNP18510 177 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 HSD17B2P37059 387 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 XCR1P46094 333 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 NPY2RP49146 381 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 TAP2Q03519 686 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 C3P1Q6ZMU1 363 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 REXO1L1PQ8IX06 675 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 FRMD8P1Q9BZ68 369 aaPredicted RBP24.47■■□□□ 1.51
PVT1-219ENST00000523427 SCN2AQ99250 2005 aa24.47■■□□□ 1.51
PVT1-219ENST00000523427 MLYCDO95822 493 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 CD46P15529 392 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 ABOP16442 354 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 ABATP80404 500 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 HSF1Q00613 529 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 CUL1Q13616 776 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 MEP1AQ16819 746 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 KRTCAP3Q53RY4 240 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 RNF187Q5TA31 235 aaPredicted RBP24.46■■□□□ 1.51
PVT1-219ENST00000523427 ANKRD37Q7Z713 158 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 MDS2Q8NDY4 140 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 ZCCHC10Q8TBK6 192 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 MCOLN3Q8TDD5 553 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 THAP3Q8WTV1 239 aaPredicted RBP24.46■■□□□ 1.51
PVT1-219ENST00000523427 SLC30A3Q99726 388 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 RBCK1Q9BYM8 510 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 GPAMQ9HCL2 828 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 AKAP9Q99996 3911 aa24.46■■□□□ 1.51
PVT1-219ENST00000523427 H0YIG0 161 aa24.45■■□□□ 1.5
PVT1-219ENST00000523427 AGAP20933 346 aa24.45■■□□□ 1.5
PVT1-219ENST00000523427 ACTN3Q08043 901 aaPredicted RBP24.45■■□□□ 1.5
PVT1-219ENST00000523427 TYSND1Q2T9J0 566 aa24.45■■□□□ 1.5
PVT1-219ENST00000523427 GALNTL5Q7Z4T8 443 aa24.45■■□□□ 1.5
PVT1-219ENST00000523427 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.45■■□□□ 1.5
PVT1-219ENST00000523427 CHTF18Q8WVB6 975 aa24.45■■□□□ 1.5
PVT1-219ENST00000523427 NPAS2Q99743 824 aa24.45■■□□□ 1.5
PVT1-219ENST00000523427 EBNA1BP2Q99848 306 aaKnown RBP24.45■■□□□ 1.5
PVT1-219ENST00000523427 ZNF835Q9Y2P0 537 aa24.45■■□□□ 1.5
PVT1-219ENST00000523427 CACNA1CQ13936 2221 aa24.45■■□□□ 1.5
PVT1-219ENST00000523427 CDC123O75794 336 aaPredicted RBP24.44■■□□□ 1.5
PVT1-219ENST00000523427 ZNF75DP51815 510 aa24.44■■□□□ 1.5
PVT1-219ENST00000523427 H3F3CQ6NXT2 135 aa24.44■■□□□ 1.5
PVT1-219ENST00000523427 GSTA5Q7RTV2 222 aa24.44■■□□□ 1.5
PVT1-219ENST00000523427 AGAP11Q8TF27 550 aa24.44■■□□□ 1.5
PVT1-219ENST00000523427 TCF12Q99081 682 aa24.44■■□□□ 1.5
PVT1-219ENST00000523427 KIFC1Q9BW19 673 aa24.44■■□□□ 1.5
PVT1-219ENST00000523427 EIF2B3Q9NR50 452 aaKnown RBP24.44■■□□□ 1.5
PVT1-219ENST00000523427 DRG1Q9Y295 367 aaKnown RBP24.44■■□□□ 1.5
PVT1-219ENST00000523427 SCN3AQ9NY46 2000 aa24.44■■□□□ 1.5
PVT1-219ENST00000523427 MTORP42345 2549 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 NCOA6Q14686 2063 aaPredicted RBP24.43■■□□□ 1.5
PVT1-219ENST00000523427 GABRR3A8MPY1 467 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 ASNA1O43681 348 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 NSA2O95478 260 aaKnown RBP24.43■■□□□ 1.5
PVT1-219ENST00000523427 TLE4Q04727 773 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 MAPKAPK3Q16644 382 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 SFT2D3Q587I9 215 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 MEI1Q5TIA1 1274 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 PAPD4Q6PIY7 484 aaKnown RBP24.43■■□□□ 1.5
PVT1-219ENST00000523427 VN1R4Q7Z5H5 301 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 CDH24Q86UP0 819 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 TMEM178AQ8NBL3 297 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 FRMD6Q96NE9 622 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 BAG1Q99933 345 aaPredicted RBP24.43■■□□□ 1.5
PVT1-219ENST00000523427 MED13LQ71F56 2210 aa24.43■■□□□ 1.5
PVT1-219ENST00000523427 RDH16O75452 317 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 BCL6P41182 706 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 RELAQ04206 551 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 PTK6Q13882 451 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 NSDHLQ15738 373 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 EXT1Q16394 746 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 TTLL9Q3SXZ7 439 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 Q6ZPB1 254 aaPredicted RBP24.42■■□□□ 1.5
PVT1-219ENST00000523427 CENPUQ71F23 418 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 PRELID2Q8N945 189 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 FAM98AQ8NCA5 519 aaKnown RBP24.42■■□□□ 1.5
PVT1-219ENST00000523427 ALKBH8Q96BT7 664 aaKnown RBP24.42■■□□□ 1.5
PVT1-219ENST00000523427 SCMH1Q96GD3 660 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 CCDC138Q96M89 665 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 CDCP1Q9H5V8 836 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 ANKHQ9HCJ1 492 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 PCDHGB6Q9Y5F9 930 aa24.42■■□□□ 1.5
PVT1-219ENST00000523427 CTAGE9A4FU28 777 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 ZNF860A6NHJ4 632 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 SP1P08047 785 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 AGTR2P50052 363 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 CLCN7P51798 805 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 SLC25A25Q6KCM7 469 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 NEPROQ6NW34 567 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms