RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 MAGEA4P43358 317 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 ARSFP54793 590 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 NAE1Q13564 534 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 ATP1A4Q13733 1029 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 WHAMMP3Q1A5X7 153 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 PRTGQ2VWP7 1150 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 KRTAP21-3Q3LHN1 58 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 C3orf62Q6ZUJ4 267 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 CISD2Q8N5K1 135 aaKnown RBP14.36□□□□□ -0.11
PCM1-218ENST00000523055 TTC29Q8NA56 475 aaPredicted RBP14.36□□□□□ -0.11
PCM1-218ENST00000523055 MOCOSQ96EN8 888 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 PRAP1Q96NZ9 151 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 OR2A5Q96R48 311 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 SMAD5Q99717 465 aaKnown RBP14.36□□□□□ -0.11
PCM1-218ENST00000523055 ENAMQ9NRM1 1142 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 ZDHHC18Q9NUE0 388 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 ARL15Q9NXU5 204 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 CTSFQ9UBX1 484 aa14.36□□□□□ -0.11
PCM1-218ENST00000523055 GPN3Q9UHW5 284 aaPredicted RBP14.36□□□□□ -0.11
PCM1-218ENST00000523055 RUVBL1Q9Y265 456 aaKnown RBP14.36□□□□□ -0.11
PCM1-218ENST00000523055 DCHS2Q6V1P9 2916 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 FFAR3O14843 346 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 SLC16A5O15375 505 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 GPR42O15529 346 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 PHGDHO43175 533 aaKnown RBP14.35□□□□□ -0.11
PCM1-218ENST00000523055 UMODP07911 640 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 GUCY2DQ02846 1103 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 CAV1Q03135 178 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 PPP1R3AQ16821 1122 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 SHISA6Q6ZSJ9 500 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 SPATA6LQ8N4H0 392 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 CSNK1A1LQ8N752 337 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 OR4K3Q96R72 315 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 RBBP8Q99708 897 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 DHRS4Q9BTZ2 278 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 SGPP1Q9BX95 441 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 NSMCE4AQ9NXX6 385 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 DMGDHQ9UI17 866 aaKnown RBP14.35□□□□□ -0.11
PCM1-218ENST00000523055 NTNG1Q9Y2I2 539 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 PADI2Q9Y2J8 665 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 TACC2O95359 2948 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 NAV3Q8IVL0 2385 aa14.35□□□□□ -0.11
PCM1-218ENST00000523055 WISP3O95389 354 aaPredicted RBP14.34□□□□□ -0.11
PCM1-218ENST00000523055 HIST1H2AGP0C0S8 130 aaPredicted RBP14.34□□□□□ -0.11
PCM1-218ENST00000523055 EZRP15311 586 aaKnown RBP14.34□□□□□ -0.11
PCM1-218ENST00000523055 HIST1H2ADP20671 130 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 FOLR3P41439 243 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 ABATP80404 500 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 NAA25Q14CX7 972 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 NKG7Q16617 165 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 KBTBD12Q3ZCT8 623 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 MRGPREQ86SM8 312 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 HPS6Q86YV9 775 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 CTAGE3PQ8IX95 158 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 OR2Y1Q8NGV0 311 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 FBF1Q8TES7 1133 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 PDLIM5Q96HC4 596 aaKnown RBP14.34□□□□□ -0.11
PCM1-218ENST00000523055 CABS1Q96KC9 395 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 HIST1H2AHQ96KK5 128 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 SPSB2Q99619 263 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 HIST1H2AJQ99878 128 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 MACROD1Q9BQ69 325 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 MESP1Q9BRJ9 268 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 H2AFJQ9BTM1 129 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 PHACTR1Q9C0D0 580 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 GPAMQ9HCL2 828 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 MRPS2Q9Y399 296 aaKnown RBP14.34□□□□□ -0.11
PCM1-218ENST00000523055 SVILO95425 2214 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 ZGRF1Q86YA3 2104 aa14.34□□□□□ -0.11
PCM1-218ENST00000523055 FEZF1A0PJY2 475 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 CDH1P12830 882 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 NPPBP16860 134 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 GP5P40197 560 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 CSNK1G2P78368 415 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 MEF2AQ02078 507 aaPredicted RBP14.33□□□□□ -0.11
PCM1-218ENST00000523055 TSNQ15631 228 aaKnown RBP14.33□□□□□ -0.11
PCM1-218ENST00000523055 YOD1Q5VVQ6 348 aaPredicted RBP14.33□□□□□ -0.11
PCM1-218ENST00000523055 SP5Q6BEB4 398 aaPredicted RBP14.33□□□□□ -0.11
PCM1-218ENST00000523055 VN1R4Q7Z5H5 301 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 PPP1R32Q7Z5V6 425 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 IQCKQ8N0W5 287 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 SHISA5Q8N114 240 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 ARHGEF39Q8N4T4 335 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 PPM1NQ8N819 430 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 CDKL2Q92772 493 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 GPR22Q99680 433 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 CPNE1Q99829 537 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 C17orf62Q9BQA9 187 aa14.33□□□□□ -0.11
PCM1-218ENST00000523055 SOX17Q9H6I2 414 aaPredicted RBP14.33□□□□□ -0.11
PCM1-218ENST00000523055 PCNX1Q96RV3 2341 aa14.33□□□□□ -0.12
PCM1-218ENST00000523055 CNTRLQ7Z7A1 2325 aa14.33□□□□□ -0.12
PCM1-218ENST00000523055 A6NL46 340 aa14.32□□□□□ -0.12
PCM1-218ENST00000523055 ONECUT2O95948 504 aa14.32□□□□□ -0.12
PCM1-218ENST00000523055 BCL6P41182 706 aa14.32□□□□□ -0.12
PCM1-218ENST00000523055 AP1S2P56377 157 aa14.32□□□□□ -0.12
PCM1-218ENST00000523055 USP10Q14694 798 aaKnown RBP14.32□□□□□ -0.12
PCM1-218ENST00000523055 MUM1Q2TAK8 710 aa14.32□□□□□ -0.12
PCM1-218ENST00000523055 FAM214AQ32MH5 1076 aa14.32□□□□□ -0.12
PCM1-218ENST00000523055 C18orf21Q32NC0 220 aaPredicted RBP14.32□□□□□ -0.12
PCM1-218ENST00000523055 LCTLQ6UWM7 567 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms