RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 MYOCQ99972 504 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ETAA1Q9NY74 926 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 C1orf226A1L170 272 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SLC1A7O00341 560 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 BCKDKO14874 412 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SLC16A6O15403 523 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 XYLBO75191 536 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HSD3B1P14060 373 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 IDSP22304 550 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HSD3B2P26439 372 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SLC6A11P48066 632 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GJA8P48165 433 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ENTPD1P49961 510 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RPS6KA3P51812 740 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 IL1RL1Q01638 556 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GRSF1Q12849 480 aaKnown RBP eCLIP10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 STARD3Q14849 445 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PDE12Q6L8Q7 609 aaKnown RBP10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 NRSN1Q8IZ57 195 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PGBD3Q8N328 593 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SYNPOQ8N3V7 929 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ZNF707Q96C28 371 aaPredicted RBP10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CHST8Q9H2A9 424 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 KCNE2Q9Y6J6 123 aa10.37□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GNG14A0A1W2PPG7 69 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 TRIM64BA6NI03 449 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SAP18O00422 153 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 XPNPEP2O43895 674 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 NTRK1P04629 796 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 FABP3P05413 133 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 NPPBP16860 134 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GSTM2P28161 218 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 AQP1P29972 269 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 TIA1P31483 386 aaKnown RBP eCLIP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GALK1P51570 392 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RAD23AP54725 363 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CASP9P55211 416 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ST8SIA6P61647 398 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 MEF2AQ02078 507 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SIM2Q14190 667 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GTF2IRD2BQ6EKJ0 949 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CBLL1Q75N03 491 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GTF2IRD2Q86UP8 949 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HCAR2Q8TDS4 363 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GABARAPL1Q9H0R8 117 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SPNS1Q9H2V7 528 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RIBC2Q9H4K1 309 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 TM9SF3Q9HD45 589 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SH3BP4Q9P0V3 963 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 FZD4Q9ULV1 537 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 MRPS23Q9Y3D9 190 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 KIAA1549LQ6ZVL6 1849 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ANTXRLA6NF34 631 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 MGAT4DA6NG13 374 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 OTOL1A6NHN0 477 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PTGES3LE9PB15 166 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SLC9A3R1O14745 358 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 TLL1O43897 1013 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PCDH7O60245 1069 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 FKBP9O95302 570 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ABCB1P08183 1280 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ITGAMP11215 1152 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HOXA9P31269 272 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 E2F2Q14209 437 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SLBPQ14493 270 aaKnown RBP eCLIP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 LAIR1Q6GTX8 287 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RAET1GQ6H3X3 334 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 MED27Q6P2C8 311 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ERICH5Q6P6B1 374 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ZNF852Q6ZMS4 543 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 EIF3MQ7L2H7 374 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ZBTB46Q86UZ6 589 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ZNF547Q8IVP9 402 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 NPAS3Q8IXF0 933 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PIK3C3Q8NEB9 887 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 OR4K1Q8NGD4 311 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SP7Q8TDD2 431 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 TANKQ92844 425 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 TBC1D20Q96BZ9 403 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RAD9AQ99638 391 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RPS6KA6Q9UK32 745 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PCYT1BQ9Y5K3 369 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ORC6Q9Y5N6 252 aa10.36□□□□□ -0.75
RAB11FIP1-204ENST00000522774 hCG_2014768A0A024R1R8 64 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ANKRD33BA6NCL7 494 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PSMD11O00231 422 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 MMP20O60882 483 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 C6P13671 934 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ZNF8P17098 575 aaPredicted RBP10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 EPHA2P29317 976 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ASMTP46597 345 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CLK3P49761 638 aaKnown RBP10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GABARAPL2P60520 117 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 IL5RAQ01344 420 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CDK5R2Q13319 367 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RFX4Q33E94 735 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 IQCCQ4KMZ1 466 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 BCL7AQ4VC05 210 aa10.35□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SPIN4Q56A73 249 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms