RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 B4GALT4O60513 344 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 NEURL1O76050 574 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TM7SF2O76062 418 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 GNA14O95837 355 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 EGFP01133 1207 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ITGB3P05106 788 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SP9P0CG40 484 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ITGB6P18564 788 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 MAOAP21397 527 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 BMP5P22003 454 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 U2AF2P26368 475 aaKnown RBP eCLIP3.81□□□□□ -1.81e-9■■■■□ 21.1
SKP1-209ENST00000522552 CHATP28329 748 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PTGER4P35408 488 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ATP5C1P36542 298 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 PTGFRP43088 359 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TNFRSF4P43489 277 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ACADVLP49748 655 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CRYBB1P53674 252 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 SOX10P56693 466 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CLDN8P56748 225 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 SLC8A3P57103 927 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CTAG1AP78358 180 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 MYBPC1Q00872 1141 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 NPTX1Q15818 432 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PCK2Q16822 640 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 EIF2S3LQ2VIR3 472 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 NKAIN1Q4KMZ8 207 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 AKNAD1Q5T1N1 836 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PRAMEF5Q5TYX0 476 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PRAMEF6Q5VXH4 476 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 AP1ARQ63HQ0 302 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZNF770Q6IQ21 691 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 LRRC8BQ6P9F7 803 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CBLN3Q6UW01 205 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CD164L2Q6UWJ8 174 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ARHGAP22Q7Z5H3 698 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 BCDIN3DQ7Z5W3 292 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 AMIGO1Q86WK6 493 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ECHDC2Q86YB7 292 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CD302Q8IX05 232 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TCAIMQ8N3R3 496 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 LCORLQ8N3X6 602 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 COMMD1Q8N668 190 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CSGALNACT2Q8N6G5 542 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 LRRC17Q8N6Y2 441 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PROKR1Q8TCW9 393 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 TRIB2Q92519 343 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ERGIC1Q969X5 290 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 KIAA1143Q96AT1 154 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZNF707Q96C28 371 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 GRAMD2BQ96HH9 432 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ARL5BQ96KC2 179 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ALKBH7Q9BT30 221 aaPredicted RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 PINK1Q9BXM7 581 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PARVGQ9HBI0 331 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 NEK6Q9HC98 313 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ZFP14Q9HCL3 533 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 CYSLTR2Q9NS75 346 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 QPCTLQ9NXS2 382 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ASIC5Q9NY37 505 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 RNF14Q9UBS8 474 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 NARFQ9UHQ1 456 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 ANGPTL2Q9UKU9 493 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 RUVBL2Q9Y230 463 aaKnown RBP3.81□□□□□ -1.8
SKP1-209ENST00000522552 NME7Q9Y5B8 376 aa3.81□□□□□ -1.8
SKP1-209ENST00000522552 PFASO15067 1338 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 TRBV5-7A0A0A0MS05 114 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 WDR27A2RRH5 827 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 TCP11X1B4DZS4 312 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 SUPT3HB4E1H0 165 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 WASH3PC4AMC7 463 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 MS4A18H0YCH9 400 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 KLF11O14901 512 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 FCMRO60667 390 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 SDC3O75056 442 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 ATP6AP2O75787 350 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 SERPINI2O75830 405 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 MT-CO3P00414 261 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 S100A6P06703 90 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 CRYGCP07315 174 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 NPSP0C0P6 89 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 STAG3L1P0CL83 205 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 UNGP13051 313 aaPredicted RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 CEACAM1P13688 526 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 F3P13726 295 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 GNSP15586 552 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 ZNF3P17036 446 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 DPP4P27487 766 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 CD1BP29016 333 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 NF2P35240 595 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 COMPP49747 757 aaPredicted RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 CLCN4P51793 760 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 CLDN15P56746 228 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 FKBP1BP68106 108 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 BNIP1Q12981 228 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 MAB21L1Q13394 359 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 TOB2Q14106 344 aaPredicted RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 VEZF1Q14119 521 aa3.8□□□□□ -1.8
SKP1-209ENST00000522552 DHX34Q14147 1143 aaKnown RBP3.8□□□□□ -1.8
SKP1-209ENST00000522552 TRIP10Q15642 601 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms