RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 TRPV5Q9NQA5 729 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 ZDHHC7Q9NXF8 308 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 NPIPA1Q9UND3 350 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 MYO9BQ13459 2157 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 XRN1Q8IZH2 1706 aaKnown RBP15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 TGM5O43548 720 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 CDH1P12830 882 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 GKP32189 559 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 STK19P49842 368 aaPredicted RBP15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 ABATP80404 500 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 CDK6Q00534 326 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 MORN1Q5T089 497 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 PQLC3Q8N755 202 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 OR5AK3PQ8NH89 298 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 FCGR1BQ92637 280 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 SCAMP4Q969E2 229 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 ZDHHC18Q9NUE0 388 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 DKKL1Q9UK85 242 aa15.77■□□□□ 0.11
PCDHA3-201ENST00000522353 DLX3O60479 287 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 RPS13P62277 151 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 GSTM4Q03013 218 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 TGFBIQ15582 683 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 OR6N1Q8NGY5 312 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 CD244Q9BZW8 370 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 SLC17A6Q9P2U8 582 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 CLEC4AQ9UMR7 237 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 CACNA1FO60840 1977 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 LDB2O43679 373 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 AIREO43918 545 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 H1F0P07305 194 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 FHP07954 510 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 ETS2P15036 469 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 HNF1BP35680 557 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 ADNP2Q6IQ32 1131 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 TXNDC5Q8NBS9 432 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 OR10G2Q8NGC3 310 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 TIMMDC1Q9NPL8 285 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 IGKV6-21A0A0C4DH24 114 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 SLC6A9P48067 706 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 CASP6P55212 293 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 TSPAN5P62079 268 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 ST3GAL3Q11203 375 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 TICAM1Q8IUC6 712 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 NR4A3Q92570 626 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 PRTFDC1Q9NRG1 225 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 CD207Q9UJ71 328 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 SLC16A5O15375 505 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 CAPN5O15484 640 aaPredicted RBP15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 BCHEP06276 602 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 RBMS1P29558 406 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 GDF5P43026 501 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 VBP1P61758 197 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 ZNF630Q2M218 657 aaPredicted RBP15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 TMEM214Q6NUQ4 689 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 CEACAM20Q6UY09 585 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 TAS1R3Q7RTX0 852 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 PIGWQ7Z7B1 504 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 PNLDC1Q8NA58 520 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 OR52E4Q8NGH9 312 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 CENPMQ9NSP4 180 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 C14orf105Q9NVL8 296 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 PEX16Q9Y5Y5 336 aa15.76■□□□□ 0.11
PCDHA3-201ENST00000522353 C2orf78A6NCI8 922 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 BTN3A3O00478 584 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 ENDOUP21128 410 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 GBX2P52951 348 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 SLC18A1P54219 525 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 RAB2AP61019 212 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 ADGRE1Q14246 886 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 CST6Q15828 149 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 ZC3H14Q6PJT7 736 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 SUSD1Q6UWL2 747 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 PROKR2Q8NFJ6 384 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 OR4K14Q8NGD5 310 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 UFD1Q92890 307 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 RELTQ969Z4 430 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 ARMC5Q96C12 935 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 CHCHD6Q9BRQ6 235 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 SCML1Q9UN30 329 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 DSC3Q14574 896 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 LIN52Q52LA3 116 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 KIAA1161Q6NSJ0 714 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 ZNF676Q8N7Q3 588 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 PELOQ9BRX2 385 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 TEX264Q9Y6I9 313 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 PRSS51A0A1B0GVH4 220 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 TFECO14948 347 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 STATHP02808 62 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 SELENOVP59797 346 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 ZNF267Q14586 743 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 GANABQ14697 944 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 UBE2J2Q8N2K1 259 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 C2CD4AQ8NCU7 369 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 MOAP1Q96BY2 351 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 IMP4Q96G21 291 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 CNDP2Q96KP4 475 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 ABCB9Q9NP78 766 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 PLAGL1Q9UM63 463 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 MUSKO15146 869 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms