RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PCBD2Q9H0N5 130 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 MKL2Q9ULH7 1088 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 VWA7Q9Y334 891 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 SAR1BQ9Y6B6 198 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 TEX264Q9Y6I9 313 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 IGHV1-45A0A0A0MS14 117 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 IL1RNP18510 177 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 FDXRP22570 491 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 BCL6P41182 706 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 ARL4CP56559 192 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 MEF2AQ02078 507 aaPredicted RBP19.62■□□□□ 0.73
SDCBP-209ENST00000522243 MFAP5Q13361 173 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 MFSD4BQ5TF39 518 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 HIST2H2BCQ6DN03 193 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 LCTLQ6UWM7 567 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 GALNT7Q86SF2 657 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 BRIX1Q8TDN6 353 aaKnown RBP19.62■□□□□ 0.73
SDCBP-209ENST00000522243 RUNDC3BQ96NL0 473 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 SGPP1Q9BX95 441 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 ARL15Q9NXU5 204 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 PTGFRNQ9P2B2 879 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 IKZF3Q9UKT9 509 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 PYCARDQ9ULZ3 195 aa19.62■□□□□ 0.73
SDCBP-209ENST00000522243 KCNE1BA0A087WTH5 132 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 BMP10O95393 424 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 GUCA1CO95843 209 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 PRR35P0CG20 571 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 NPPBP16860 134 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 SAT1P21673 171 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 MRPS25P82663 173 aaKnown RBP19.61■□□□□ 0.73
SDCBP-209ENST00000522243 CDC16Q13042 620 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 ZNF169Q14929 603 aaPredicted RBP19.61■□□□□ 0.73
SDCBP-209ENST00000522243 STEAP4Q687X5 459 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 CAPN13Q6MZZ7 669 aaPredicted RBP19.61■□□□□ 0.73
SDCBP-209ENST00000522243 FAM45BPQ6NSW5 357 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 ASPGQ86U10 573 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 SLC26A11Q86WA9 606 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 SIRT6Q8N6T7 355 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 KCT2Q8NC54 265 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 FAM45AQ8TCE6 357 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 PSMF1Q92530 271 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 SNF8Q96H20 258 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 HCN3Q9P1Z3 774 aa19.61■□□□□ 0.73
SDCBP-209ENST00000522243 PTPN13Q12923 2485 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 PABPN1LA6NDY0 278 aaKnown RBP19.6■□□□□ 0.73
SDCBP-209ENST00000522243 ANKUB1A6NFN9 424 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 H0YIG0 161 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 SGK494L7N484 410 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 SEC31AO94979 1220 aaKnown RBP19.6■□□□□ 0.73
SDCBP-209ENST00000522243 NSA2O95478 260 aaKnown RBP19.6■□□□□ 0.73
SDCBP-209ENST00000522243 UQCRHP07919 91 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 CCND1P24385 295 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 PAFAH1B1P43034 410 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 PDIA2Q13087 525 aaKnown RBP19.6■□□□□ 0.73
SDCBP-209ENST00000522243 FASTKD3Q14CZ7 662 aaKnown RBP19.6■□□□□ 0.73
SDCBP-209ENST00000522243 PCOLCEQ15113 449 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 TMEM214Q6NUQ4 689 aaKnown RBP19.6■□□□□ 0.73
SDCBP-209ENST00000522243 CAMKVQ8NCB2 501 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 OR51Q1Q8NH59 317 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 SLC13A3Q8WWT9 602 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 LRRC39Q96DD0 335 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 TM4SF19Q96DZ7 209 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 THAP11Q96EK4 314 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 LMF1Q96S06 567 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 TRIM54Q9BYV2 358 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 RIC8BQ9NVN3 520 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 PLA2G3Q9NZ20 509 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 PSAT1Q9Y617 370 aa19.6■□□□□ 0.73
SDCBP-209ENST00000522243 IGHV3-20A0A0C4DH32 117 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 OR2W5A6NFC9 320 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 EFCAB8A8MWE9 144 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 CCDC188H7C350 402 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 TP73O15350 636 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 F10P00742 488 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 SERPINA7P05543 415 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 GRK3P35626 688 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 ELOAQ14241 798 aaKnown RBP19.59■□□□□ 0.73
SDCBP-209ENST00000522243 TLR1Q15399 786 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 MINDY4Q4G0A6 757 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 B3GNTL1Q67FW5 361 aaPredicted RBP19.59■□□□□ 0.73
SDCBP-209ENST00000522243 DUPD1Q68J44 220 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 TMEM205Q6UW68 189 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 TMEM207Q6UWW9 146 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 MFSD9Q8NBP5 474 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 FBXO36Q8NEA4 188 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 GRHL3Q8TE85 626 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 OR4K3Q96R72 315 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 KRT12Q99456 494 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 HAUS8Q9BT25 410 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 VN1R1Q9GZP7 353 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 AGPAT4Q9NRZ5 378 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 ZFATQ9P243 1243 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 CORO1CQ9ULV4 474 aaPredicted RBP19.59■□□□□ 0.73
SDCBP-209ENST00000522243 SNX24Q9Y343 169 aa19.59■□□□□ 0.73
SDCBP-209ENST00000522243 FLNCQ14315 2725 aa19.58■□□□□ 0.73
SDCBP-209ENST00000522243 LOC102723996A0A087X1L8 192 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 A0A1W2PQ72 361 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 FANCGO15287 622 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 WFS1O76024 890 aa19.58■□□□□ 0.72
SDCBP-209ENST00000522243 C8orf89P0DMQ9 161 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms