RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 HDAC10Q969S8 669 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 TMEM125Q96AQ2 219 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 CERS2Q96G23 380 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 ZDHHC12Q96GR4 267 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 MAGED4Q96JG8 741 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 C1orf74Q96LT6 269 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 NSMCE3Q96MG7 304 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 GPR137Q96N19 417 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 FCRL5Q96RD9 977 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 BDH2Q9BUT1 245 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 MECRQ9BV79 373 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 TSSK1BQ9BXA7 367 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 STN1Q9H668 368 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 NOL6Q9H6R4 1146 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 CATSPERBQ9H7T0 1116 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 LRRC40Q9H9A6 602 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 KCNK13Q9HB14 408 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 GLOD4Q9HC38 313 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 KCNJ16Q9NPI9 418 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 BEX4Q9NWD9 120 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 COQ3Q9NZJ6 369 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 BFARQ9NZS9 450 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 LHX3Q9UBR4 397 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 EMCNQ9ULC0 261 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 SOX13Q9UN79 622 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 TRIM33Q9UPN9 1127 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 MPDZO75970 2070 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ZCWPW2A0A1B0GU75 182 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 KLF11O14901 512 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 MATN3O15232 486 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 FGF10O15520 208 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 SNX2O60749 519 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 USP1O94782 785 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 MT-CYBP00156 380 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 F10P00742 488 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 HLA-DQB2P05538 268 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 POLBP06746 335 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 BPGMP07738 259 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 T-ENOLP0DO92 83 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 TROVE2P10155 538 aaKnown RBP eCLIP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 NEFHP12036 1026 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 NQO1P15559 274 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 XRCC1P18887 633 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 TEAD1P28347 426 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 GP5P40197 560 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 KCNJ2P63252 427 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ELF3P78545 371 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 FRG1Q14331 258 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 PCBP2Q15366 365 aaKnown RBP eCLIP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 CYTH1Q15438 398 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 CHI3L2Q15782 390 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 GRTP1Q5TC63 336 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 DENND5AQ6IQ26 1287 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ZNF449Q6P9G9 518 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 NLRP9Q7RTR0 991 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 HSD11B1LQ7Z5J1 315 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 TBC1D1Q86TI0 1168 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ZNF354CQ86Y25 554 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 CCDC71Q8IV32 467 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 NUDCD3Q8IVD9 361 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ATPAF2Q8N5M1 289 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 MEIOBQ8N635 442 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 LZTR1Q8N653 840 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 RTL3Q8N8U3 475 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 OR2Y1Q8NGV0 311 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 OR1L3Q8NH93 324 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ZNF398Q8TD17 642 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ACMSDQ8TDX5 336 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 PSMF1Q92530 271 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 CDKL2Q92772 493 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 CLIP3Q96DZ5 547 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 NUS1Q96E22 293 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 MFSD3Q96ES6 412 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 EXOC2Q96KP1 924 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 PPM1MQ96MI6 270 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 AGAP2Q99490 1192 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 CPNE1Q99829 537 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 TBL1YQ9BQ87 522 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 MESP1Q9BRJ9 268 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 FICDQ9BVA6 458 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 LHPPQ9H008 270 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 IQCGQ9H095 443 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 DMRT3Q9NQL9 472 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 IARS2Q9NSE4 1012 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 KLC4Q9NSK0 619 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 RBM22Q9NW64 420 aaKnown RBP eCLIP6.97□□□□□ -1.291e-6■■■□□ 19.1
CTNNA1-227ENST00000521387 DCTN4Q9UJW0 460 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 ASB1Q9Y576 335 aa6.97□□□□□ -1.29
CTNNA1-227ENST00000521387 DYSFO75923 2080 aa6.96□□□□□ -1.29
CTNNA1-227ENST00000521387 C17orf113A0A1B0GUU1 675 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 MAGEB16A2A368 324 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 CFAP73A6NFT4 308 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 OR5K4A6NMS3 321 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 A6NNC1 897 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 BIRC5O15392 142 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 PLIN3O60664 434 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 DCTN3O75935 186 aa6.96□□□□□ -1.3
CTNNA1-227ENST00000521387 ANXA9O76027 345 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms