RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 IGSF5Q9NSI5 407 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 NXT1Q9UKK6 140 aaKnown RBP19.64■□□□□ 0.73
TRIM35-203ENST00000521253 RNF112Q9ULX5 631 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 CDC14AQ9UNH5 594 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 KCNE2Q9Y6J6 123 aa19.64■□□□□ 0.73
TRIM35-203ENST00000521253 FASNP49327 2511 aaKnown RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 A0A0A6YYC8 382 aaPredicted RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 MKRN2OSH3BPM6 223 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 I3L1I5 382 aaPredicted RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 TAPBPO15533 448 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 WDR47O94967 919 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 LTA4HP09960 611 aaKnown RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 FBLP22087 321 aaKnown RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 SLC26A3P40879 764 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 KCNC1P48547 511 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 DSG2Q14126 1118 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 FAM53BQ14153 422 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 NDUFA9Q16795 377 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 CDKL4Q5MAI5 379 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 PPP1R32Q7Z5V6 425 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 ASPGQ86U10 573 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 ISCA2Q86U28 154 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 TCAIMQ8N3R3 496 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 CAMKVQ8NCB2 501 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 UHMK1Q8TAS1 419 aaKnown RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 SLC13A3Q8WWT9 602 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 MMABQ96EY8 250 aaPredicted RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 TMEM79Q9BSE2 394 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 PELI2Q9HAT8 420 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 ZNF71Q9NQZ8 489 aaPredicted RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 ACSS2Q9NR19 701 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 SNX15Q9NRS6 342 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 WWOXQ9NZC7 414 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 ZNF282Q9UDV7 671 aaPredicted RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 ACOT9Q9Y305 439 aa19.63■□□□□ 0.73
TRIM35-203ENST00000521253 MDC1Q14676 2089 aaKnown RBP19.63■□□□□ 0.73
TRIM35-203ENST00000521253 TRBC2A0A5B9 178 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 B8ZZF3 427 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 OR1F1O43749 312 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 ALDOAP04075 364 aaKnown RBP19.62■□□□□ 0.73
TRIM35-203ENST00000521253 C2P06681 752 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 TFEBP19484 476 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 GGT5P36269 586 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 IRF9Q00978 393 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 OCA2Q04671 838 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 FBXO48Q5FWF7 155 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 SULT1C3Q6IMI6 304 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 TMEM214Q6NUQ4 689 aaKnown RBP19.62■□□□□ 0.73
TRIM35-203ENST00000521253 NXPE4Q6UWF7 544 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 TMPRSS11BQ86T26 416 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 CENPLQ8N0S6 344 aaPredicted RBP19.62■□□□□ 0.73
TRIM35-203ENST00000521253 AMER3Q8N944 861 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 TMEM102Q8N9M5 508 aaPredicted RBP19.62■□□□□ 0.73
TRIM35-203ENST00000521253 KCT2Q8NC54 265 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 PDPRQ8NCN5 879 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 STT3BQ8TCJ2 826 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 KCTD4Q8WVF5 259 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 EXT2Q93063 718 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 NXNL1Q96CM4 212 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 IP6K3Q96PC2 410 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 PAFAH2Q99487 392 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 NMRAL1Q9HBL8 299 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 CD274Q9NZQ7 290 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 PCSK5Q92824 1860 aa19.62■□□□□ 0.73
TRIM35-203ENST00000521253 IGLV3-12A0A075B6K2 115 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 A0A087WUV0 522 aaPredicted RBP19.61■□□□□ 0.73
TRIM35-203ENST00000521253 A0A087X1B8 175 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 K7EM74 188 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 FFAR3O14843 346 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 GPR42O15529 346 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 PRPF4O43172 522 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRIM35-203ENST00000521253 INHBAP08476 426 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 ZGLP1P0C6A0 271 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 MMP11P24347 488 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 SCTRP47872 440 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 SERPINB8P50452 374 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 CCL11P51671 97 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 REEP5Q00765 189 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 KLC1Q07866 573 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 MED25Q71SY5 747 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 PRSS41Q7RTY9 318 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 CCDC91Q7Z6B0 441 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 PRSS58Q8IYP2 241 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 OR9A4Q8NGU2 314 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 ZCCHC10Q8TBK6 192 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 STAG3L4Q8TBR4 150 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 ESAMQ96AP7 390 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 MIEF2Q96C03 454 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 ATOH8Q96SQ7 321 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 YIPF2Q9BWQ6 316 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 P4HTMQ9NXG6 502 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 TRPC4Q9UBN4 977 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 PTBP2Q9UKA9 531 aaKnown RBP19.61■□□□□ 0.73
TRIM35-203ENST00000521253 TP53TG5Q9Y2B4 290 aa19.61■□□□□ 0.73
TRIM35-203ENST00000521253 A0A096LPK6 155 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 PEX12O00623 359 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 NDUFS4O43181 175 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 KERAO60938 352 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 IPO13O94829 963 aaKnown RBP19.6■□□□□ 0.73
TRIM35-203ENST00000521253 FAM153BP0C7A2 387 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms