RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 EEF1DP29692 281 aaKnown RBP3.32□□□□□ -1.88
HDAC2-208ENST00000520746 HOXC13P31276 330 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 MAPK12P53778 367 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 HMGCS2P54868 508 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 LRIT3Q3SXY7 679 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 ELFN2Q5R3F8 820 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 ARMC4Q5T2S8 1044 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 BEND3Q5T5X7 828 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 FKBP1CQ5VVH2 108 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 MFSD14CQ5VZR4 134 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 KRT39Q6A163 491 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 APOBEC3HQ6NTF7 200 aaKnown RBP3.32□□□□□ -1.88
HDAC2-208ENST00000520746 FAM198BQ6UWH4 519 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 ZBTB49Q6ZSB9 765 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 MFSD6Q6ZSS7 791 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 ISCA2Q86U28 154 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 TMEM139Q8IV31 216 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 NME8Q8N427 588 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SLC4A11Q8NBS3 891 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 OLIG1Q8TAK6 271 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 GRHL3Q8TE85 626 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 CCDC107Q8WV48 283 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SSMEM1Q8WWF3 244 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 ATL1Q8WXF7 558 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SYN2Q92777 582 aaPredicted RBP3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SENP5Q96HI0 755 aaPredicted RBP3.32□□□□□ -1.88
HDAC2-208ENST00000520746 CNDP2Q96KP4 475 aaKnown RBP3.32□□□□□ -1.88
HDAC2-208ENST00000520746 Q9N2K0 584 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SLC52A3Q9NQ40 469 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 CCDC177Q9NQR7 707 aaPredicted RBP3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SERINC1Q9NRX5 453 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 LRWD1Q9UFC0 647 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 C2CD2Q9Y426 696 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 RIPK3Q9Y572 518 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SSC5DA1L4H1 1573 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SMCHD1A6NHR9 2005 aa3.32□□□□□ -1.88
HDAC2-208ENST00000520746 SCN9AQ15858 1988 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 KDM3BQ7LBC6 1761 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 COL4A1P02462 1669 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 IGLV9-49A0A0B4J1Y8 123 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 A0A1W2PPM1 405 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 NEMP2A6NFY4 417 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 BLOC1S5-TXNDC5H3BN57 136 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 SLC22A2O15244 555 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 RNASEH1O60930 286 aaKnown RBP3.31□□□□□ -1.88
HDAC2-208ENST00000520746 TBX10O75333 385 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 PIGNO95427 931 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 AMBPP02760 352 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 RAB40ALP0C0E4 278 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 FOSL2P15408 326 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 JAK1P23458 1154 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 CHRNB4P30926 498 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 CEACAM8P31997 349 aaPredicted RBP3.31□□□□□ -1.88
HDAC2-208ENST00000520746 RAB28P51157 221 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 CCNA1P78396 465 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 PTPRCAPQ14761 206 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 LRRC26Q2I0M4 334 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 VWC2Q2TAL6 325 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 C11orf63Q6NUN7 778 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 MFSD12Q6NUT3 480 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 RBPMS2Q6ZRY4 209 aaKnown RBP3.31□□□□□ -1.88
HDAC2-208ENST00000520746 SH2D5Q6ZV89 423 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 ARHGAP22Q7Z5H3 698 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 CDK20Q8IZL9 346 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF383Q8NA42 475 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 NPEPL1Q8NDH3 523 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 GPRC5AQ8NFJ5 357 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 DHX58Q96C10 678 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF501Q96CX3 271 aaPredicted RBP3.31□□□□□ -1.88
HDAC2-208ENST00000520746 HDAC11Q96DB2 347 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 RMDN1Q96DB5 314 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 FAM122AQ96E09 287 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 THOC1Q96FV9 657 aaKnown RBP3.31□□□□□ -1.88
HDAC2-208ENST00000520746 F2RL3Q96RI0 385 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 CDX2Q99626 313 aaPredicted RBP3.31□□□□□ -1.88
HDAC2-208ENST00000520746 PRO3102Q9H379 93 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 MYNNQ9NPC7 610 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 RAI14Q9P0K7 980 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.31□□□□□ -1.88
HDAC2-208ENST00000520746 CACNG4Q9UBN1 327 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 NRBP1Q9UHY1 535 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 ZDHHC2Q9UIJ5 367 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 DAPK2Q9UIK4 370 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 CPSF3Q9UKF6 684 aaKnown RBP3.31□□□□□ -1.88
HDAC2-208ENST00000520746 RNF150Q9ULK6 438 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 KCNJ14Q9UNX9 436 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 AGTPBP1Q9UPW5 1226 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 RPS6KL1Q9Y6S9 549 aa3.31□□□□□ -1.88
HDAC2-208ENST00000520746 LAMB2P55268 1798 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 DDX60Q8IY21 1712 aaKnown RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 TRIOBPQ9H2D6 2365 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 LOC101059948A0A1B0GTJ6 334 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 A0A1W2PN81 502 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 A0A1W2PPQ1 181 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 ANKRD61A6NGH8 418 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 A8MXE2 369 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 KBTBD13C9JR72 458 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 PRKRAO75569 313 aaKnown RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 NGFP01138 241 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 IGHV2-70P01814 119 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms