RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CKAP2Q8WWK9 683 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 TRIM44Q96DX7 344 aaPredicted RBP3.74□□□□□ -1.81
SQLE-204ENST00000520493 ALG14Q96F25 216 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 CFAP36Q96G28 342 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 C17orf77Q96MU5 243 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 PANX3Q96QZ0 392 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 TSPYL1Q9H0U9 437 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 S1PR5Q9H228 398 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 APOBEC3GQ9HC16 384 aaKnown RBP3.74□□□□□ -1.81
SQLE-204ENST00000520493 ZBTB20Q9HC78 741 aaPredicted RBP3.74□□□□□ -1.81
SQLE-204ENST00000520493 SYTL2Q9HCH5 934 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 TRPC7Q9HCX4 862 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 ZNF334Q9HCZ1 680 aaPredicted RBP3.74□□□□□ -1.81
SQLE-204ENST00000520493 P4HTMQ9NXG6 502 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.74□□□□□ -1.81
SQLE-204ENST00000520493 TBK1Q9UHD2 729 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 TCF19Q9Y242 345 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 STRAPQ9Y3F4 350 aaKnown RBP3.74□□□□□ -1.81
SQLE-204ENST00000520493 CLCA3PQ9Y6N3 262 aa3.74□□□□□ -1.81
SQLE-204ENST00000520493 TAF1P21675 1872 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 SYNJ2BP-COX16A0A087WUM0 186 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 SNX3O60493 162 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 SMPD2O60906 423 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 ATP9AO75110 1047 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 NME6O75414 186 aaPredicted RBP3.73□□□□□ -1.81
SQLE-204ENST00000520493 RPS6KA5O75582 802 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 BAG4O95429 457 aaKnown RBP3.73□□□□□ -1.81
SQLE-204ENST00000520493 IGHV4-39P01824 125 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 KRT19P08727 400 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 HSPA8P11142 646 aaKnown RBP3.73□□□□□ -1.81
SQLE-204ENST00000520493 GP1BBP13224 206 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 ETS1P14921 441 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 CCND2P30279 289 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 ACAA2P42765 397 aaKnown RBP3.73□□□□□ -1.81
SQLE-204ENST00000520493 GLIPR1P48060 266 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 CAMLGP49069 296 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 FMO5P49326 533 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 FUT6P51993 359 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 KCNJ10P78508 379 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 FOLH1Q04609 750 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 SULT2A1Q06520 285 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 STXBP2Q15833 593 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 ODF4Q2M2E3 257 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 LACTB2Q53H82 288 aaPredicted RBP3.73□□□□□ -1.81
SQLE-204ENST00000520493 KCTD11Q693B1 232 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 ZNF554Q86TJ5 538 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 BATF2Q8N1L9 274 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 DENND6BQ8NEG7 585 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 RNASE8Q8TDE3 154 aaKnown RBP3.73□□□□□ -1.81
SQLE-204ENST00000520493 AP2M1Q96CW1 435 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 C14orf79Q96F83 325 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 LINGO1Q96FE5 620 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 STAMBPL1Q96FJ0 436 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 CDKN2AIPNLQ96HQ2 116 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 VPS39Q96JC1 886 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 ACTL8Q9H568 366 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 MAGEF1Q9HAY2 307 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 LRRC4Q9HBW1 653 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 FAM118AQ9NWS6 357 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 ZDHHC2Q9UIJ5 367 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 RALYQ9UKM9 306 aaKnown RBP3.73□□□□□ -1.81
SQLE-204ENST00000520493 DUSP12Q9UNI6 340 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 WDR83OSQ9Y284 106 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 IKBKGQ9Y6K9 419 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 HEG1Q9ULI3 1381 aa3.73□□□□□ -1.81
SQLE-204ENST00000520493 ATP8B3O60423 1300 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 IL16Q14005 1332 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 A0A0B4J203 849 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 C2orf92A0A1B0GVN3 265 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 KPNA7A9QM74 516 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 CTSVO60911 334 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 MOCS2O96007 188 aaPredicted RBP3.72□□□□□ -1.81
SQLE-204ENST00000520493 GHRP10912 638 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 ACP2P11117 423 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 FGF5P12034 268 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 KRT3P12035 628 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 AREGP15514 252 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 FERP16591 822 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 ACP1P24666 158 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 ADSSP30520 456 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 SFNP31947 248 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 MNDAP41218 407 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 THOP1P52888 689 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 CACNG1Q06432 222 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 PDE7AQ13946 482 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 DPYSQ14117 519 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 MAPK11Q15759 364 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 PHKG1Q16816 387 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 CTU2Q2VPK5 515 aaKnown RBP3.72□□□□□ -1.81
SQLE-204ENST00000520493 PDLIM3Q53GG5 364 aaPredicted RBP3.72□□□□□ -1.81
SQLE-204ENST00000520493 CCNYL2Q5T2Q4 361 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 PDSS1Q5T2R2 415 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 C19orf48Q6RUI8 117 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 OLFM4Q6UX06 510 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 RAD9BQ6WBX8 426 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 GPR141Q7Z602 305 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 ANKRD46Q86W74 232 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 PLD3Q8IV08 490 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 SERPINA12Q8IW75 414 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 CFAP206Q8IYR0 622 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms