RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 CYP1A2P05177 515 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 RETP07949 1114 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 SRPRAP08240 638 aaKnown RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 ACADMP11310 421 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 NNMTP40261 264 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 P2RY2P41231 377 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 STK19P49842 368 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 GALCP54803 685 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 AIF1P55008 147 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 CDH15P55291 814 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 KRT83P78385 493 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 GPR68Q15743 365 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 ASTE1Q2TB18 679 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 HNRNPA1L2Q32P51 320 aaKnown RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 MANEAQ5SRI9 462 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 FAM72AQ5TYM5 149 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 FAM72DQ6L9T8 149 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 TMEM71Q6P5X7 295 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 LPCAT2Q7L5N7 544 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 PRSS45Q7RTY3 260 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 SERPINA11Q86U17 422 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 FAM72BQ86X60 149 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 PYROXD2Q8N2H3 581 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 LRRC57Q8N9N7 239 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 OR52K2Q8NGK3 314 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 OR2T3Q8NH03 318 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 TMEM170AQ8WVE7 144 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 PRCCQ92733 491 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 INPP5DQ92835 1189 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 TBC1D31Q96DN5 1066 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 ALG14Q96F25 216 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 SIPA1Q96FS4 1042 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 CHP1Q99653 195 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 NCAPGQ9BPX3 1015 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 WDR77Q9BQA1 342 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 PAIP1Q9H074 479 aaKnown RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 RETREG1Q9H6L5 497 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 NHEJ1Q9H9Q4 299 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-208ENST00000520228 PRSS16Q9NQE7 514 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 PCSK1NQ9UHG2 260 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 GMEB2Q9UKD1 530 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 FZD10Q9ULW2 581 aa6.84□□□□□ -1.31
SDCBP-208ENST00000520228 CACNA1IQ9P0X4 2223 aa6.84□□□□□ -1.32
SDCBP-208ENST00000520228 GVINP1Q7Z2Y8 2422 aa6.84□□□□□ -1.32
SDCBP-208ENST00000520228 ZNF638Q14966 1978 aaKnown RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 A0A0D9SEW6 157 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 IGLV5-39A0A0G2JS06 123 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 EDDM13A0A1B0GTR0 161 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 HSPB6O14558 160 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 CEP104O60308 925 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 SNAP91O60641 907 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 RNASEH1O60930 286 aaKnown RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 LRCH4O75427 683 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 H2AFZP0C0S5 128 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 BCKDHBP21953 392 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 MIPP30301 263 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 PCK1P35558 622 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 BLKP51451 505 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 TPMTP51580 245 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 ARSFP54793 590 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 RPP30P78346 268 aaKnown RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 GNA12Q03113 381 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 SLC18A2Q05940 514 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 LAMB3Q13751 1172 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 PIGHQ14442 188 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 ODF3L2Q3SX64 289 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 ACCSLQ4AC99 568 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 Q5PR19 223 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 ERMARDQ5T6L9 678 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 C9orf64Q5T6V5 341 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 IL20RBQ6UXL0 311 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 SLC36A4Q6YBV0 504 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 H2AFVQ71UI9 128 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 NLRP14Q86W24 1093 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 PSTKQ8IV42 348 aaKnown RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 DCLK2Q8N568 766 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 PLD5Q8N7P1 536 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 FRMD1Q8N878 549 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 DCAF4L2Q8NA75 395 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 CTNNBL1Q8WYA6 563 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 ARHGEF26Q96DR7 871 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 ZNF48Q96MX3 618 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 NUP85Q9BW27 656 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 SLC32A1Q9H598 525 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 GPATCH2LQ9NWQ4 482 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 PPP1R14DQ9NXH3 145 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 RNF7Q9UBF6 113 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 ANAPC7Q9UJX3 599 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 NENFQ9UMX5 172 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 RAP2CQ9Y3L5 183 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 DENND4CQ5VZ89 1909 aa6.83□□□□□ -1.32
SDCBP-208ENST00000520228 PTPRZ1P23471 2315 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-208ENST00000520228 IGHV1OR15-9A0A0B4J2B8 117 aa6.82□□□□□ -1.32
SDCBP-208ENST00000520228 PABPN1LA6NDY0 278 aaKnown RBP6.82□□□□□ -1.32
SDCBP-208ENST00000520228 EIF3CLB5ME19 914 aaKnown RBP6.82□□□□□ -1.32
SDCBP-208ENST00000520228 KIF1CO43896 1103 aaKnown RBP6.82□□□□□ -1.32
SDCBP-208ENST00000520228 IL1AP01583 271 aa6.82□□□□□ -1.32
SDCBP-208ENST00000520228 DNTTP04053 509 aa6.82□□□□□ -1.32
SDCBP-208ENST00000520228 MYZAPP0CAP1 466 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms