RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 ZIC5Q96T25 663 aa10.96□□□□□ -0.66
NUDCD1-203ENST00000519607 DPH2Q9BQC3 489 aaPredicted RBP10.96□□□□□ -0.66
NUDCD1-203ENST00000519607 COPS4Q9BT78 406 aa10.96□□□□□ -0.66
NUDCD1-203ENST00000519607 GABARAPL3Q9BY60 117 aa10.96□□□□□ -0.66
NUDCD1-203ENST00000519607 HMX1Q9NP08 348 aaPredicted RBP10.96□□□□□ -0.66
NUDCD1-203ENST00000519607 HS3ST2Q9Y278 367 aa10.96□□□□□ -0.66
NUDCD1-203ENST00000519607 H0YIV9 168 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ZNF197O14709 1029 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 GRM6O15303 877 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PCDHGA12O60330 932 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 KDM1AO60341 852 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 CNOT3O75175 753 aaKnown RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ABCB1P08183 1280 aaPredicted RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 GSTM1P09488 218 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ANXA4P09525 319 aaPredicted RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 C1SP09871 688 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 CYP2A6P11509 494 aaPredicted RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 BMP4P12644 408 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 BMP1P13497 986 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ZNF30P17039 623 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 GABRR2P28476 465 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 CD40LGP29965 261 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 RRM2P31350 389 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 MAPK9P45984 424 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 EIF2B2P49770 351 aaKnown RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PPP5CP53041 499 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 CREMQ03060 361 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 RGNQ15493 299 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 SYTL3Q4VX76 610 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 SPIN4Q56A73 249 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 TMEM236Q5W0B7 351 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 GRHL2Q6ISB3 625 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 TUBA3EQ6PEY2 450 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PLEKHG7Q6ZR37 379 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 GPR155Q7Z3F1 870 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 NPAS3Q8IXF0 933 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ENTHD1Q8IYW4 607 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 MFSD4AQ8N468 514 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 RHOXF1Q8NHV9 184 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 TIFAQ96CG3 184 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 MMP27Q9H306 513 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 SGK2Q9HBY8 427 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ZNF334Q9HCZ1 680 aaPredicted RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ABT1Q9ULW3 272 aaKnown RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 MAFFQ9ULX9 164 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 WDR37Q9Y2I8 494 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 GNG14A0A1W2PPG7 69 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 TMEM221A6NGB7 291 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 SAGE2PA6NJ88 616 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 GABRR3A8MPY1 467 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 TNFRSF11BO00300 401 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 AIREO43918 545 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PRAMEF4O60810 478 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ANXA8P13928 327 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ITGA2P17301 1181 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 EPHA2P29317 976 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PCGF2P35227 344 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 UGT2B10P36537 528 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 RECQLP46063 649 aaPredicted RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 STK19P49842 368 aaPredicted RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 RPS3AP61247 264 aaKnown RBP10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 SELENOWP63302 87 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 KCNJ10P78508 379 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 DOC2AQ14183 400 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PRAMEF9Q5VWM5 478 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 LHX8Q68G74 356 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 ANGPTL8Q6UXH0 198 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 DEPDC4Q8N2C3 294 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 RNF175Q8N4F7 328 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 AMER2Q8N7J2 671 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 SPPL2AQ8TCT8 520 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 TMEM159Q96B96 161 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 REPS1Q96D71 796 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 MED8Q96G25 268 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 C7orf34Q96L11 122 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 MYOCQ99972 504 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PSD2Q9BQI7 771 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 DCSTAMPQ9H295 470 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 DSN1Q9H410 356 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 FAM83DQ9H4H8 585 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 RAD18Q9NS91 495 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PLCXD1Q9NUJ7 323 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 SH3BP4Q9P0V3 963 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 B4GALT6Q9UBX8 382 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 CD84Q9UIB8 345 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 OSGIN1Q9UJX0 560 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 CLEC4EQ9ULY5 219 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 TRIM17Q9Y577 477 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 PCDHGA6Q9Y5G7 932 aa10.95□□□□□ -0.66
NUDCD1-203ENST00000519607 DENND4CQ5VZ89 1909 aa10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 ISPDA4D126 451 aa10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 WBP4O75554 376 aaKnown RBP10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 SLCO2B1O94956 709 aa10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 CATP04040 527 aaKnown RBP10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 LCKP06239 509 aa10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 TGM1P22735 817 aa10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 SLC7A9P82251 487 aa10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 TBCEQ15813 527 aaPredicted RBP10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 TCTN1Q2MV58 587 aa10.94□□□□□ -0.66
NUDCD1-203ENST00000519607 ZNF404Q494X3 552 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms