RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	HIST2H2AA3	Q6FI13	130 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	ANKRD26P1	Q6NSI1	321 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	PARM1	Q6UWI2	310 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	LCTL	Q6UWM7	567 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	NUDT18	Q6ZVK8	323 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	ARMCX6	Q7L4S7	300 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	DCUN1D3	Q8IWE4	304 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	CHPF	Q8IZ52	775 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	DHRSX	Q8N5I4	330 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	GPR156	Q8NFN8	814 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	OR5AR1	Q8NGP9	310 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	CDC26	Q8NHZ8	85 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	TFG	Q92734	400 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	NCLN	Q969V3	563 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	SH3KBP1	Q96B97	665 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	CXorf40B	Q96DE9	158 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	MRPL38	Q96DV4	380 aa	Known RBP	11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	FBXL20	Q96IG2	436 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	RBM38	Q9H0Z9	239 aa	Known RBP	11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	SPNS1	Q9H2V7	528 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	CAAP1	Q9H8G2	361 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	CLK4	Q9HAZ1	481 aa	Known RBP	11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	AASDHPPT	Q9NRN7	309 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	SERGEF	Q9UGK8	458 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	PCDHB11	Q9Y5F2	797 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	PCM1	Q15154	2024 aa		11.91	□□□□□ -0.5
SPIDR-210	ENST00000519362	C1orf226	A1L170	272 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	PCDH8	O95206	1070 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	EPN2	O95208	641 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ADH1B	P00325	375 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	HPR	P00739	348 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	CST1	P01037	141 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	LAMP2	P13473	410 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	TEAD1	P28347	426 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	TRIM23	P36406	574 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	HPCAL1	P37235	193 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	PIK3CB	P42338	1070 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	MAGEA2	P43356	314 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	TSTA3	Q13630	321 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	DAG1	Q14118	895 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	PRAMEF14	Q5SWL7	426 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ANXA8L1	Q5VT79	327 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	PRAMEF13	Q5VWM6	474 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	CPZ	Q66K79	652 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	CES5A	Q6NT32	575 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZNF621	Q6ZSS3	439 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	COMMD6	Q7Z4G1	85 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	PATL1	Q86TB9	770 aa	Known RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	FAM129C	Q86XR2	697 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	CACUL1	Q86Y37	369 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZZZ3	Q8IYH5	903 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	EID3	Q8N140	333 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	CYGB	Q8WWM9	190 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	PYURF	Q96I23	114 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	IL17F	Q96PD4	163 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	HAUS8	Q9BT25	410 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	RPP25	Q9BUL9	199 aa	Known RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	MENT	Q9BUN1	341 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	GRIP2	Q9C0E4	1043 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	MBNL1	Q9NR56	388 aa	Known RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	TM7SF3	Q9NS93	570 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ATP6V1H	Q9UI12	483 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	CKAP5	Q14008	2032 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	GNG14	A0A1W2PPG7	69 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	TRIM64C	A6NLI5	447 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	GPR89A	B7ZAQ6	455 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362		G3V2T6	193 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	RFXAP	O00287	272 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	AHCYL1	O43865	530 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	KLHL18	O94889	574 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	CLIC3	O95833	236 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	GPR89B	P0CG08	455 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	GSTT1	P30711	240 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	KIR2DL1	P43626	348 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	TUBA4A	P68366	448 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	MEF2A	Q02078	507 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZNF763	Q0D2J5	394 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ARHGAP19	Q14CB8	494 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	VMAC	Q2NL98	169 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ATAT1	Q5SQI0	421 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ERICH5	Q6P6B1	374 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	VN1R5	Q7Z5H4	357 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	PTOV1	Q86YD1	416 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZDHHC13	Q8IUH4	622 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	METTL4	Q8N3J2	472 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	HDDC3	Q8N4P3	179 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	ZNF740	Q8NDX6	193 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	VPS37A	Q8NEZ2	397 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	OR5K2	Q8NHB8	316 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	EZH1	Q92800	747 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	UBE2E3	Q969T4	207 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	DGCR14	Q96DF8	476 aa	Known RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	CHST8	Q9H2A9	424 aa		11.9	□□□□□ -0.5
SPIDR-210	ENST00000519362	TPT1P8	Q9HAU6	139 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 90 ms