RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 PREBQ9HCU5 417 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 PLSCR3Q9NRY6 295 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 TBC1D13Q9NVG8 400 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZNF282Q9UDV7 671 aaPredicted RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 TMED3Q9Y3Q3 217 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 TNRQ92752 1358 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 ASTN1O14525 1302 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 GON4LQ3T8J9 2241 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 IGKV2D-24A0A075B6R9 120 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 TRAV9-2A0A087WT02 112 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZSCAN5CA6NGD5 496 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 RRN3P2A6NIE6 340 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 NKX6-3A6NJ46 265 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 SERPINE3A8MV23 424 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 MITFO75030 526 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZWINTO95229 277 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 VENTXO95231 258 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 WISP3O95389 354 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 IGHV2-70P01814 119 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 CLEC3BP05452 202 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 RB1P06400 928 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 P0C879 139 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 HAPLN1P10915 354 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 RARGP13631 454 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 MMP9P14780 707 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 TRIM21P19474 475 aaKnown RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 C4BPBP20851 252 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 EDNRAP25101 427 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 FCGR2BP31994 310 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 FCGR2CP31995 323 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 HMGCS2P54868 508 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 CASP6P55212 293 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 MAT1AQ00266 395 aaKnown RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 EBI3Q14213 229 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 ASTE1Q2TB18 679 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 GPR33Q49SQ1 333 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 MUC21Q5SSG8 566 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 C9orf129Q5T035 196 aaKnown RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 AGBL2Q5U5Z8 902 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 LIPJQ5W064 366 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 ARMCX5Q6P1M9 558 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 CTR9Q6PD62 1173 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 RYBPQ8N488 228 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 FBXO39Q8N4B4 442 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 ESX1Q8N693 406 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 BANPQ8N9N5 519 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 OR6T1Q8NGN1 323 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 PHF10Q8WUB8 498 aaKnown RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 SYN2Q92777 582 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 C11orf52Q96A22 123 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 LRRC59Q96AG4 307 aaKnown RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 SLCO4A1Q96BD0 722 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZBED6CLQ96FA7 236 aaPredicted RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 RUNDC3BQ96NL0 473 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 MS4A10Q96PG2 267 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 SEPHS2Q99611 448 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 PAXXQ9BUH6 204 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 PPIL3Q9H2H8 161 aaKnown RBP0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 MMP27Q9H306 513 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 OPA3Q9H6K4 179 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 TBC1D17Q9HA65 648 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 WDR41Q9HAD4 459 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 WASH6PQ9NQA3 447 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 SENP1Q9P0U3 644 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 DHRS4-AS1Q9P1J3 65 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 POLLQ9UGP5 575 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZNF148Q9UQR1 794 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 CPQQ9Y646 472 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 ARID2Q68CP9 1835 aa0.89□□□□□ -2.27
RNU6-561P-201ENST00000516222 IGKV1D-17A0A075B6S4 117 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 EPOPA6NHQ4 379 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 A8MZ25 164 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 OR10H2O60403 315 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZNF253O75346 499 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 RNASEH2AO75792 299 aaKnown RBP0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CLTBP09497 229 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CD1DP15813 335 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 FASP25445 335 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 GDF1P27539 372 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 ACSL1P33121 698 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CCR9P51686 369 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZNF75DP51815 510 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CRYBA2P53672 197 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CDH8P55286 799 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 TBCEQ15813 527 aaPredicted RBP0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 DUSP5Q16690 384 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 KIAA0930Q6ICG6 404 aaPredicted RBP0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CGB2Q6NT52 195 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 PRSS55Q6UWB4 352 aaPredicted RBP0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 MCM10Q7L590 875 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CARM1Q86X55 608 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 RCOR2Q8IZ40 523 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 ADGRF2Q8IZF7 708 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 GBP7Q8N8V2 638 aaPredicted RBP0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 MCUQ8NE86 351 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 OR5M9Q8NGP3 310 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 OR1B1Q8NGR6 318 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 AFAP1L1Q8TED9 768 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 FRAT1Q92837 279 aaPredicted RBP0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 EXOC4Q96A65 974 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms