RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 TBC1D3EA0A087X179 549 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBC1D3KA0A087X1G2 549 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGKV1-9A0A0C4DH69 117 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 A0A0J9YVX5 310 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TEX13CA0A0J9YWL9 993 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 A0A0U1RQK1 487 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF816-ZNF321PA0A0X1KG74 233 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 A0A1B0GUH1 482 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 LOC102725191A0A1B0GVB3 256 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PINLYPA6NC86 204 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBC1D3BA6NDS4 549 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBC1D3FA6NER0 549 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TMEM221A6NGB7 291 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF879B4DU55 563 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 C2CD4DB7Z1M9 353 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBC1D3LB9A6J9 549 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NPIPA2E9PIF3 369 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PLOD2O00469 737 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 LECT2O14960 151 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PER2O15055 1255 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SPINT2O43291 252 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DHHO43323 396 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 XRCC3O43542 346 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RGS10O43665 173 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TCF21O43680 179 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF73O43830 326 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 EFNA2O43921 213 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 EIF4E2O60573 245 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBL1XO60907 577 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ADAP1O75689 374 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GATBO75879 557 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CST7O76096 145 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 AP2A2O94973 939 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RASAL1O95294 804 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FKBP9O95302 570 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGKV1-5P01602 117 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGLV1-47P01700 117 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGLV2-8P01709 118 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CAPN1P07384 714 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 YES1P07947 543 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 HSP90AB1P08238 724 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBC1D3HP0C7X1 549 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CKMT1AP12532 417 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SDSP20132 328 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PTPN3P26045 913 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GDF1P27539 372 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NTSR1P30989 418 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TAGLN2P37802 199 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GRIA1P42261 906 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SLC11A2P49281 568 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MTNR1BP49286 362 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MMP14P50281 582 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CDK9P50750 372 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CLCN4P51793 760 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 LIMK1P53667 647 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TERF1P54274 439 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 VSX2P58304 361 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MLF1P58340 268 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TFAMQ00059 246 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IL1RL1Q01638 556 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CNTN2Q02246 1040 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FOLH1Q04609 750 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TGM3Q08188 693 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 EPS8Q12929 822 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NOGQ13253 232 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DRP2Q13474 957 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PIN1Q13526 163 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ITGA7Q13683 1181 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PKP1Q13835 747 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RASGRF1Q13972 1273 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 VEZF1Q14119 521 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NFE2L1Q14494 772 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ELAVL3Q14576 367 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF235Q14590 738 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 C16orf72Q14CZ0 275 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SART3Q15020 963 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SF3A1Q15459 793 aaKnown RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IMPG1Q17R60 797 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 EXOC3L2Q2M3D2 409 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SOWAHAQ2M3V2 549 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 P3H1Q32P28 736 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GXYLT1Q4G148 440 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SLC10A5Q5PT55 438 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 LY6G6FQ5SQ64 297 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FAM69AQ5T7M9 428 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBC1D3GQ6DHY5 549 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IL31Q6EBC2 164 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBC1D3CQ6IPX1 549 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF773Q6PK81 442 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ARSKQ6UWY0 536 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF841Q6ZN19 808 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MFSD6Q6ZSS7 791 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 LCA10Q71F78 164 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FKBP9P1Q75LS8 142 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PTAR1Q7Z6K3 402 aaPredicted RBP-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TADA2BQ86TJ2 420 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TTC7BQ86TV6 843 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 AACSQ86V21 672 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DGKHQ86XP1 1220 aa-0.78□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF677Q86XU0 584 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms