RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 MOGAT2Q3SYC2 334 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 CST9LP1Q5W188 147 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 ZBTB49Q6ZSB9 765 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 NUP54Q7Z3B4 507 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 NDUFAF2Q8N183 169 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 RYBPQ8N488 228 aaPredicted RBP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 CCDC89Q8N998 374 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 APOBEC4Q8WW27 367 aaKnown RBP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 CFAP57Q96MR6 1250 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 NECTIN4Q96NY8 510 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 SOSTQ9BQB4 213 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 PRRG4Q9BZD6 226 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 MED20Q9H944 212 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 MYNNQ9NPC7 610 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 CHST11Q9NPF2 352 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 TEX10Q9NXF1 929 aaPredicted RBP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 C19orf25Q9UFG5 118 aaPredicted RBP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 RPS6KL1Q9Y6S9 549 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 SHPRHQ149N8 1683 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 MYH14Q7Z406 1995 aaKnown RBP3.19□□□□□ -1.9
LINC01088-211ENST00000515597 FGD6Q6ZV73 1430 aa3.19□□□□□ -1.9
LINC01088-211ENST00000515597 ITSN2Q9NZM3 1697 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 NCOA2Q15596 1464 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 TRIM77I1YAP6 450 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 O00370 1275 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 ARPC2O15144 300 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 TADA2AO75478 443 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 SAGP10523 405 aaPredicted RBP3.18□□□□□ -1.9
LINC01088-211ENST00000515597 GP1BBP13224 206 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 IRF2P14316 349 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 DARSP14868 501 aaKnown RBP3.18□□□□□ -1.9
LINC01088-211ENST00000515597 LHCGRP22888 699 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 KRT20P35900 424 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 LHX1P48742 406 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 HNRNPKP61978 463 aaKnown RBP eCLIP3.18□□□□□ -1.9
LINC01088-211ENST00000515597 PAX8Q06710 450 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 COX10Q12887 443 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 CUL3Q13618 768 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 RASA2Q15283 850 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 MTHFSDQ2M296 383 aaKnown RBP3.18□□□□□ -1.9
LINC01088-211ENST00000515597 MCMDC2Q4G0Z9 681 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 C16orf54Q6UWD8 224 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 KIF6Q6ZMV9 814 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 PLPPR4Q7Z2D5 763 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 MFN1Q8IWA4 741 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 LGI2Q8N0V4 545 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 SLC4A11Q8NBS3 891 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 C17orf47Q8NEP4 570 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 NUP37Q8NFH4 326 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 OR2L2Q8NH16 312 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 ROBO4Q8WZ75 1007 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 RASL10AQ92737 203 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 SECISBP2LQ93073 1101 aaKnown RBP3.18□□□□□ -1.9
LINC01088-211ENST00000515597 PGAP3Q96FM1 320 aaPredicted RBP3.18□□□□□ -1.9
LINC01088-211ENST00000515597 NKX3-1Q99801 234 aaPredicted RBP3.18□□□□□ -1.9
LINC01088-211ENST00000515597 RAB11FIP5Q9BXF6 653 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 TXLNGYQ9BZA5 131 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 RABEP2Q9H5N1 569 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 CDH20Q9HBT6 801 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 NDE1Q9NXR1 346 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 MUTYHQ9UIF7 546 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 TMED3Q9Y3Q3 217 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 CSNK1G3Q9Y6M4 447 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 ATRNO75882 1429 aa3.18□□□□□ -1.9
LINC01088-211ENST00000515597 TNRQ92752 1358 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 A0A1W2PPM1 405 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 H0YAE9 185 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 CLDN4O14493 209 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 KRT33AO76009 404 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 GGPS1O95749 300 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 FYNP06241 537 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 ATP5BP06576 529 aaKnown RBP3.17□□□□□ -1.9
LINC01088-211ENST00000515597 HSP90AA1P07900 732 aaKnown RBP3.17□□□□□ -1.9
LINC01088-211ENST00000515597 CPT2P23786 658 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 MC5RP33032 325 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 PTGER4P35408 488 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 PRELPP51888 382 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 PEX6Q13608 980 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 ITGA7Q13683 1181 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 VEZF1Q14119 521 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 ZNF74Q16587 644 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 TCP11X2Q5H9J9 407 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 LEKR1Q6ZMV7 388 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 FRRS1Q6ZNA5 592 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 CATSPERDQ86XM0 798 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 MMD2Q8IY49 270 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 LSMEM1Q8N8F7 131 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 XXYLT1Q8NBI6 393 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 OR4K1Q8NGD4 311 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 GAL3ST4Q96RP7 486 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 ZMYND12Q9H0C1 365 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 BLMP54132 1417 aaPredicted RBP3.17□□□□□ -1.9
LINC01088-211ENST00000515597 MIA2Q96PC5 1412 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 NWD1Q149M9 1564 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 CFAP74Q9C0B2 1584 aa3.17□□□□□ -1.9
LINC01088-211ENST00000515597 BRWD3Q6RI45 1802 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 ZNF518AQ6AHZ1 1483 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 KIF14Q15058 1648 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 AHDC1Q5TGY3 1603 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms