RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 LZTS3O60299 673 aaPredicted RBP14.32□□□□□ -0.12
NUP54-217ENST00000514987 LILRB5O75023 590 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 IDSP22304 550 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 PBLDP30039 288 aaPredicted RBP14.32□□□□□ -0.12
NUP54-217ENST00000514987 PCGF2P35227 344 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 TBPL1P62380 186 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 ZNF763Q0D2J5 394 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 KEAP1Q14145 624 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 ELOAQ14241 798 aaKnown RBP14.32□□□□□ -0.12
NUP54-217ENST00000514987 ELAVL3Q14576 367 aaKnown RBP14.32□□□□□ -0.12
NUP54-217ENST00000514987 CCSMST1Q4G0I0 132 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 C9orf64Q5T6V5 341 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 GPR107Q5VW38 600 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 ZNF551Q7Z340 670 aaPredicted RBP14.32□□□□□ -0.12
NUP54-217ENST00000514987 DSG4Q86SJ6 1040 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 TMPRSS11BQ86T26 416 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 HORMAD1Q86X24 394 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 PTOV1Q86YD1 416 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 TRAPPC5Q8IUR0 188 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 ETFBKMTQ8IXQ9 262 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 CHPFQ8IZ52 775 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 RNF175Q8N4F7 328 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 PIK3C3Q8NEB9 887 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 CDC26Q8NHZ8 85 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 FBLIM1Q8WUP2 373 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 SH3KBP1Q96B97 665 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 ZNF707Q96C28 371 aaPredicted RBP14.32□□□□□ -0.12
NUP54-217ENST00000514987 MTERF3Q96E29 417 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 TRIT1Q9H3H1 467 aaKnown RBP14.32□□□□□ -0.12
NUP54-217ENST00000514987 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 DYRK4Q9NR20 520 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 DEC1Q9P2X7 70 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 PRKAG2Q9UGJ0 569 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 EBF1Q9UH73 591 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 TMEFF2Q9UIK5 374 aaPredicted RBP14.32□□□□□ -0.12
NUP54-217ENST00000514987 UTS2RQ9UKP6 389 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 ITM2BQ9Y287 266 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 HCFC2Q9Y5Z7 792 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 BRCA2P51587 3418 aa14.32□□□□□ -0.12
NUP54-217ENST00000514987 GNG14A0A1W2PPG7 69 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 C1orf226A1L170 272 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 H3BMQ9 156 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 BCKDKO14874 412 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 PI15O43692 258 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 SOD1P00441 154 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 NPPBP16860 134 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 PDHA2P29803 388 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 IRS1P35568 1242 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 PIK3CBP42338 1070 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 ISL1P61371 349 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 RPS13P62277 151 aaKnown RBP14.31□□□□□ -0.12
NUP54-217ENST00000514987 HTRA3P83110 453 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 HPCAP84074 193 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 RPA4Q13156 261 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 NEDD8Q15843 81 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 POM121L1PQ3SYA9 428 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 TMEM240Q5SV17 173 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 RAET1GQ6H3X3 334 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 TMEM179BQ7Z7N9 219 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 CLECL1Q8IZS7 167 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 HS3ST5Q8IZT8 346 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 LILRA3Q8N6C8 439 aaPredicted RBP14.31□□□□□ -0.12
NUP54-217ENST00000514987 C11orf65Q8NCR3 313 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 VN1R2Q8NFZ6 395 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 OR2L2Q8NH16 312 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 GOT1L1Q8NHS2 421 aaPredicted RBP14.31□□□□□ -0.12
NUP54-217ENST00000514987 GAB3Q8WWW8 586 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 RAB7BQ96AH8 199 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 COG8Q96MW5 612 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 OR2AG1Q9H205 316 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 CHST8Q9H2A9 424 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 RAD21L1Q9H4I0 556 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 FANCEQ9HB96 536 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 CXXC1Q9P0U4 656 aaPredicted RBP14.31□□□□□ -0.12
NUP54-217ENST00000514987 CIDEBQ9UHD4 219 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 FZD4Q9ULV1 537 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 CDC14AQ9UNH5 594 aa14.31□□□□□ -0.12
NUP54-217ENST00000514987 M0QX08 132 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 SPINT1O43278 529 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 MRPS14O60783 128 aaKnown RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 FKBP9O95302 570 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 B3GALT4O96024 378 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 C6P13671 934 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 ADRB3P13945 408 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 YAP1P46937 504 aaKnown RBP14.3□□□□□ -0.12
NUP54-217ENST00000514987 ITGA1P56199 1179 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 CXCR4P61073 352 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 CD47Q08722 323 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 RBBP4Q09028 425 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 SLBPQ14493 270 aaKnown RBP eCLIP14.3□□□□□ -0.12
NUP54-217ENST00000514987 HKDC1Q2TB90 917 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 NXPE4Q6UWF7 544 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 ARHGAP22Q7Z5H3 698 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 SPARTQ8N0X7 666 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 ZFP90Q8TF47 636 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 RAB2BQ8WUD1 216 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 SLC5A11Q8WWX8 675 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 HERVK_113Q902F9 699 aa14.3□□□□□ -0.12
NUP54-217ENST00000514987 ARRDC3Q96B67 414 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms