RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ITSN2	Q9NZM3	1697 aa		3.15	□□□□□ -1.9
CALCOCO2-223	ENST00000514267		A0A087X0K7	114 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267		A0A0A6YYC8	382 aa	Predicted RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C2orf81	A6NN90	581 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SRRM3	A6NNA2	597 aa	Predicted RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267		I3L1I5	382 aa	Predicted RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	BUB3	O43684	328 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SCO2	O43819	266 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NME6	O75414	186 aa	Predicted RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PRKRA	O75569	313 aa	Known RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	STAM2	O75886	525 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PIGN	O95427	931 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	IGHV4-39	P01824	125 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	F7	P08709	466 aa	Predicted RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ABHD2	P08910	425 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	STAG3L1	P0CL83	205 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CDH1	P12830	882 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ELAVL4	P26378	380 aa	Known RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	OR3A1	P47881	315 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	HOXA1	P49639	335 aa	Predicted RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	MAZ	P56270	477 aa	Known RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SLC34A1	Q06495	639 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZNF415	Q09FC8	603 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RASGEF1B	Q0VAM2	473 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CETN1	Q12798	172 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	MAPK11	Q15759	364 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ITPRIPL2	Q3MIP1	535 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZNF718	Q3SXZ3	478 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ACCSL	Q4AC99	568 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SPDYC	Q5MJ68	293 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CCNYL2	Q5T2Q4	361 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	AGAP6	Q5VW22	663 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FUT10	Q6P4F1	479 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PRSS57	Q6UWY2	283 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TOM1L2	Q6ZVM7	507 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	IL17REL	Q6ZVW7	336 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ADCK1	Q86TW2	530 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PLD3	Q8IV08	490 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TMEM139	Q8IV31	216 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NAGS	Q8N159	534 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CNNM3	Q8NE01	707 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	HSD17B8	Q92506	261 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PIGB	Q92521	554 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SCRN2	Q96FV2	425 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	LMLN	Q96KR4	655 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RTP3	Q9BQQ7	232 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	IDI2	Q9BXS1	227 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CSTL1	Q9H114	145 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SDCBP2	Q9H190	292 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	P2RY12	Q9H244	342 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TMEM245	Q9H330	911 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C10orf88	Q9H8K7	445 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZBTB20	Q9HC78	741 aa	Predicted RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CHST11	Q9NPF2	352 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SLC38A7	Q9NVC3	462 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	OCIAD1	Q9NX40	245 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FETUB	Q9UGM5	382 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DAPK2	Q9UIK4	370 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CCPG1	Q9ULG6	757 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RUVBL2	Q9Y230	463 aa	Known RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FOXA2	Q9Y261	457 aa	Predicted RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	HBS1L	Q9Y450	684 aa	Known RBP	3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ATP6V0A2	Q9Y487	856 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ABCC5	O15440	1437 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PTPRG	P23470	1445 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NPHP3	Q7Z494	1330 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CAMSAP2	Q08AD1	1489 aa		3.15	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NUP155	O75694	1391 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DHX29	Q7Z478	1369 aa	Known RBP	3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	AKNA	Q7Z591	1439 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	IGHV4OR15-8	A0A075B7B6	117 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267		A0A1W2PS18	150 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ASPDH	A6ND91	283 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C5orf51	A6NDU8	294 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ANKRD61	A6NGH8	418 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C17orf105	B2RV13	164 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	HNRNPCL2	B2RXH8	293 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C2CD4D	B7Z1M9	353 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TXNL1	O43396	289 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	XPNPEP2	O43895	674 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CTSV	O60911	334 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZBTB11	O95625	1053 aa	Predicted RBP	3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	APOH	P02749	345 aa	Predicted RBP	3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SBK2	P0C263	348 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	JAK1	P23458	1154 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	AHCY	P23526	432 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	OR3A3	P47888	321 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ATXN3	P54252	364 aa	Predicted RBP	3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DMPK	Q09013	629 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZBTB17	Q13105	803 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NONO	Q15233	471 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TAF13	Q15543	124 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	INA	Q16352	499 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ACKR1	Q16570	336 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	IRAK1BP1	Q5VVH5	260 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	KLHL10	Q6JEL2	608 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CORO6	Q6QEF8	472 aa		3.14	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ARMC9	Q7Z3E5	817 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms