RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GBP5Q96PP8 586 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 NRTNQ99748 197 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 ACAT2Q9BWD1 397 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 RAB11FIP5Q9BXF6 653 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 PITHD1Q9GZP4 211 aaPredicted RBP14.37□□□□□ -0.11
VCAN-211ENST00000513984 KAT8Q9H7Z6 458 aaKnown RBP14.37□□□□□ -0.11
VCAN-211ENST00000513984 ADGRE2Q9UHX3 823 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 MOSPD1Q9UJG1 213 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 ANAPC2Q9UJX6 822 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 AURKCQ9UQB9 309 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 GPSM3Q9Y4H4 160 aa14.37□□□□□ -0.11
VCAN-211ENST00000513984 FAM220BPB1ANY3 271 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 C10orf142B7Z368 130 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 FPGTO14772 594 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 TGFB1P01137 390 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 BMP2P12643 396 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 HNRNPA2B1P22626 353 aaKnown RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 CXCR2P25025 360 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 CDKN2CP42773 168 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 RAB28P51157 221 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 ZNF763Q0D2J5 394 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 NFATC4Q14934 902 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 COMMD6Q7Z4G1 85 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 METTL4Q8N3J2 472 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 ANKFN1Q8N957 763 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 TRPV3Q8NET8 790 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.36□□□□□ -0.11
VCAN-211ENST00000513984 PPWD1Q96BP3 646 aaKnown RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 CXorf40BQ96DE9 158 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 OR2M4Q96R27 311 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 NR1H4Q96RI1 486 aaPredicted RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 AIF1LQ9BQI0 150 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 PHF7Q9BWX1 381 aaPredicted RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 SEMA6AQ9H2E6 1030 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 RHBGQ9H310 441 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 VCXQ9H320 206 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 MVB12BQ9H7P6 319 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 GORASP2Q9H8Y8 452 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 AGPAT4Q9NRZ5 378 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 IMP3Q9NV31 184 aaKnown RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 INVSQ9Y283 1065 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 MDC1Q14676 2089 aaKnown RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 LRRC72A6NJI9 287 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 H0YJX3 145 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 ANXA6P08133 673 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 FCGR1AP12314 374 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 ZNF26P17031 533 aaPredicted RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 PTX3P26022 381 aaPredicted RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 PSMB5P28074 263 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 PKLRP30613 574 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 SOX11P35716 441 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 HPCAL1P37235 193 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 GZMMP51124 257 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 POLE2P56282 527 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 CLDN2P57739 230 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 REEP5Q00765 189 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 BLMHQ13867 455 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 HKDC1Q2TB90 917 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 AMIGO2Q86SJ2 522 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 OR4K1Q8NGD4 311 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 OR52E4Q8NGH9 312 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 OR2L8Q8NGY9 312 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 CDC26Q8NHZ8 85 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 N4BP2L2Q92802 583 aaPredicted RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 EME1Q96AY2 570 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 SH3KBP1Q96B97 665 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 MIEF2Q96C03 454 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 BIRC7Q96CA5 298 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 COQ8BQ96D53 544 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 OR51B5Q9H339 312 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 UBE2ZQ9H832 354 aaPredicted RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 NT5DC2Q9H857 520 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 CARS2Q9HA77 564 aaKnown RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 PRM3Q9NNZ6 103 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 BATF3Q9NR55 127 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 SLC2A4RGQ9NR83 387 aa14.36□□□□□ -0.11
VCAN-211ENST00000513984 CUEDC1Q9NWM3 386 aaPredicted RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 ARHGEF17Q96PE2 2063 aaPredicted RBP14.36□□□□□ -0.11
VCAN-211ENST00000513984 GNG14A0A1W2PPG7 69 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 ELOVL7A1L3X0 281 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 PDZK1P1A8MUH7 402 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 GSNP06396 782 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 LAMP1P11279 417 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 PIM1P11309 404 aaPredicted RBP14.35□□□□□ -0.11
VCAN-211ENST00000513984 FASP25445 335 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 SERPINB1P30740 379 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 HSPA13P48723 471 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 CCR8P51685 355 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 MICU2Q8IYU8 434 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 OR1E3Q8WZA6 343 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 GATA6Q92908 595 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 PDXPQ96GD0 296 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 AURKBQ96GD4 344 aaPredicted RBP14.35□□□□□ -0.11
VCAN-211ENST00000513984 BMFQ96LC9 184 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 WDR92Q96MX6 357 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 PRPF18Q99633 342 aaKnown RBP14.35□□□□□ -0.11
VCAN-211ENST00000513984 DUSP26Q9BV47 211 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 USP36Q9P275 1121 aaKnown RBP14.35□□□□□ -0.11
VCAN-211ENST00000513984 ATP6V1HQ9UI12 483 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 BTNL2Q9UIR0 455 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 226.7 ms