RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.79	□□□□□ -0.68	6e-8	■■■■■ 46.6
PDCD6-210	ENST00000513582	TSN	Q15631	228 aa	Known RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	DCAF4L1	Q3SXM0	396 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	NDUFAF5	Q5TEU4	345 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	TIGD3	Q6B0B8	471 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582		Q6ZSR9	355 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	SNX20	Q7Z614	316 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	CILP2	Q8IUL8	1156 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF366	Q8N895	744 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ANKRD53	Q8N9V6	530 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	C19orf18	Q8NEA5	215 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	HYLS1	Q96M11	299 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF599	Q96NL3	588 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	COL21A1	Q96P44	957 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	QRFPR	Q96P65	431 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	C3orf14	Q9HBI5	128 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF222	Q9UK12	451 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	VPS9D1	Q9Y2B5	631 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582		A0A1W2PQL4	384 aa	Predicted RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582		F8W810	466 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	OR1I1	O60431	355 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	RORC	P51449	518 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF157	P51786	506 aa	Predicted RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	RRAS2	P62070	204 aa	Predicted RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	NFKB2	Q00653	900 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	DOC2B	Q14184	412 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	RFTN2	Q52LD8	501 aa	Predicted RBP	10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZRANB3	Q5FWF4	1079 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	SPANXN4	Q5MJ08	99 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	CCNJ	Q5T5M9	372 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	GPR149	Q86SP6	731 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF605	Q86T29	641 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ATP6V1C2	Q8NEY4	427 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	OR52B6	Q8NGF0	335 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	OR6K2	Q8NGY2	324 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	CEP76	Q8TAP6	659 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	MYLPF	Q96A32	169 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	DUSP16	Q9BY84	665 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZMYM5	Q9UJ78	669 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	GMEB2	Q9UKD1	530 aa		10.79	□□□□□ -0.68
PDCD6-210	ENST00000513582	TTC3	P53804	2025 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	NCAM2	O15394	837 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	PLOD3	O60568	738 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	ALDH1A1	P00352	501 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	UROS	P10746	265 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLC2A4	P14672	509 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	HMGCL	P35914	325 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	RPL35	P42766	123 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	MAP2K3	P46734	347 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	GNPDA1	P46926	289 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	RPL38	P63173	70 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	AP5B1	Q2VPB7	878 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	FBXO43	Q4G163	708 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLC39A12	Q504Y0	691 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	TRIQK	Q629K1	86 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	CCDC149	Q6ZUS6	474 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	GPR142	Q7Z601	462 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLC34A3	Q8N130	599 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	KRTCAP2	Q8N6L1	136 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	LPCAT1	Q8NF37	534 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	WDR36	Q8NI36	951 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	RAET1E	Q8TD07	263 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	UPRT	Q96BW1	309 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	GIMAP5	Q96F15	307 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	THUMPD1	Q9NXG2	353 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	CD274	Q9NZQ7	290 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	ELF5	Q9UKW6	265 aa	Predicted RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	NDRG2	Q9UN36	371 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	ERVW-1	Q9UQF0	538 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	ASB1	Q9Y576	335 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582		A0A075B6Q4	140 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	MUSK	O15146	869 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	MRPS14	O60783	128 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	B3GALT4	O96024	378 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	CKMT1A	P12532	417 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	POU1F1	P28069	291 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	DNAJA1	P31689	397 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	DGKE	P52429	567 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	EPHA5	P54756	1037 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	PTPN5	P54829	565 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	VLDLR	P98155	873 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	DSC2	Q02487	901 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	GRIK2	Q13002	908 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	TIMM50	Q3ZCQ8	353 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	XKR7	Q5GH72	579 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	ZNF549	Q6P9A3	640 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	CLEC20A	Q6ZU45	233 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	TAC4	Q86UU9	113 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	KRT73	Q86Y46	540 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	MSRB3	Q8IXL7	192 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	MTFMT	Q96DP5	389 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	SORBS1	Q9BX66	1292 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	SLAMF7	Q9NQ25	335 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	PAK6	Q9NQU5	681 aa	Predicted RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	MS4A12	Q9NXJ0	267 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	PGAP2	Q9UHJ9	254 aa		10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	EIF2B4	Q9UI10	523 aa	Known RBP	10.78	□□□□□ -0.68
PDCD6-210	ENST00000513582	MIA3	Q5JRA6	1907 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms