RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SLC45A3Q96JT2 553 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 LRGUKQ96M69 825 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 ZNF583Q96ND8 569 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 GUCD1Q96NT3 240 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 IL17FQ96PD4 163 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 MTERF1Q99551 399 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 PRPF18Q99633 342 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 ZNF184Q99676 751 aaPredicted RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 KCTD14Q9BQ13 255 aaPredicted RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 PCED1AQ9H1Q7 454 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 IL1RL2Q9HB29 575 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 MYNNQ9NPC7 610 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 WSB2Q9NYS7 404 aaPredicted RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 AHSPQ9NZD4 102 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 WNT16Q9UBV4 365 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 BTNL2Q9UIR0 455 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 MAGEL2Q9UJ55 1249 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 MCM8Q9UJA3 840 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 TDRKHQ9Y2W6 561 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 GPSM3Q9Y4H4 160 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 AP4S1Q9Y587 144 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 PCDHB11Q9Y5F2 797 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 COLEC10Q9Y6Z7 277 aa8.05□□□□□ -1.12
RNF4-220ENST00000513578 SNRNP200O75643 2136 aaKnown RBP8.05□□□□□ -1.12
RNF4-220ENST00000513578 MDC1Q14676 2089 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 REV3LO60673 3130 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TCRBV5S2A0A599 114 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 A6NCN8 305 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 SCAMP2O15127 329 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 ARPC2O15144 300 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 HNRNPRO43390 633 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 CCNDBP1O95273 360 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 IGHV4-34P06331 123 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 ANXA4P09525 319 aaPredicted RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 CDH1P12830 882 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TCN1P20061 433 aaPredicted RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 ATP6V1B2P21281 511 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 RPL10P27635 214 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 SHMT2P34897 504 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 GZMMP51124 257 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 WNT3P56703 355 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 SESN3P58005 492 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 YBX1P67809 324 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 MRPS22P82650 360 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 CYP4F3Q08477 520 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 FZD5Q13467 585 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 PDE7AQ13946 482 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TAF11Q15544 211 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 DUOXA1Q1HG43 343 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 MUM1Q2TAK8 710 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 RABL3Q5HYI8 236 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 DEPDC1Q5TB30 811 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 ENPP7Q6UWV6 458 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 FKBP9P1Q75LS8 142 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 ARMCX6Q7L4S7 300 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 VN1R5Q7Z5H4 357 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 R3HCC1LQ7Z5L2 792 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 FAM124AQ86V42 546 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 DCP2Q8IU60 420 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 TICAM1Q8IUC6 712 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 MSRB3Q8IXL7 192 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 PGBD3Q8N328 593 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TMEM132CQ8N3T6 1108 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TMEM102Q8N9M5 508 aaPredicted RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 LINC01555Q8NAE3 123 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 HIPK4Q8NE63 616 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TTLQ8NG68 377 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 OR52E1Q8NGJ3 308 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 NELL1Q92832 810 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 SLCO4A1Q96BD0 722 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 SHDQ96IW2 340 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 EGLN2Q96KS0 407 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TSSK3Q96PN8 268 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 CPPED1Q9BRF8 314 aaPredicted RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 MS4A8Q9BY19 250 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 KLHL4Q9C0H6 718 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 BHLHE41Q9C0J9 482 aaPredicted RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 SPNS1Q9H2V7 528 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 GORASP2Q9H8Y8 452 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 CARS2Q9HA77 564 aaKnown RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 FZD3Q9NPG1 666 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TMEM184CQ9NVA4 438 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 SLC25A37Q9NYZ2 338 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 OR6C2Q9NZP2 312 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 VAPAQ9P0L0 249 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 CIDEBQ9UHD4 219 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 TAC3Q9UHF0 121 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 ADAM29Q9UKF5 820 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 PLAGL1Q9UM63 463 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 KCNK6Q9Y257 313 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 PLEKHM1Q9Y4G2 1056 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 AP1M2Q9Y6Q5 423 aa8.04□□□□□ -1.12
RNF4-220ENST00000513578 ARHGEF17Q96PE2 2063 aaPredicted RBP8.04□□□□□ -1.12
RNF4-220ENST00000513578 NUP214P35658 2090 aaPredicted RBP8.03□□□□□ -1.12
RNF4-220ENST00000513578 TRBC2A0A5B9 178 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 FAM221BA6H8Z2 402 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 ANKDD1BA6NHY2 528 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 OR5K4A6NMS3 321 aa8.03□□□□□ -1.12
RNF4-220ENST00000513578 PDZK1P1A8MUH7 402 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms