RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ATP13A3Q9H7F0 1226 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 RMI1Q9H9A7 625 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 ARNT2Q9HBZ2 717 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 FGF21Q9NSA1 209 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 OLAHQ9NV23 265 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 EXOC1Q9NV70 894 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 TMEM248Q9NWD8 314 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 JKAMPQ9P055 326 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 VPS18Q9P253 973 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CPNE7Q9UBL6 633 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 OR12D3Q9UGF7 316 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 RUVBL1Q9Y265 456 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 CNTRLQ7Z7A1 2325 aa3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 FLNAP21333 2647 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-218ENST00000513341 NCOA6Q14686 2063 aaPredicted RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TRGV8A0A0C4DH27 118 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC9B1P1A6NJY1 282 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 H3BUI4 141 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC16A3O15427 465 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TPD52L2O43399 206 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC43A1O75387 559 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PMPCBO75439 489 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 SCRG1O75711 98 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 RASSF9O75901 435 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TMCC1O94876 653 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CHEK2O96017 543 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 VIPP01282 170 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CAPN1P07384 714 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 HBQ1P09105 142 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 EPB41P11171 864 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PPP3CBP16298 524 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 GM2AP17900 193 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 HNRNPH3P31942 346 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CA5AP35218 305 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 GPR1P46091 355 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PIK3CGP48736 1102 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 POLD2P49005 469 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TUBB4BP68371 445 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 NKX6-1P78426 367 aaPredicted RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 FKBP3Q00688 224 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CEBPZQ03701 1054 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 BCL2L1Q07817 233 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CDC16Q13042 620 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 AIMP2Q13155 320 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PDCLQ13371 301 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 NFATC2Q13469 925 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TUBB3Q13509 450 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TUBB2AQ13885 445 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 STK38Q15208 465 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CYTH1Q15438 398 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 INAQ16352 499 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 KYNUQ16719 465 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PARP15Q460N3 678 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CBWD6Q4V339 395 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 FLYWCH1Q4VC44 716 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ZCWPW2Q504Y3 356 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PLAC9Q5JTB6 97 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CBWD3Q5JTY5 395 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CBWD5Q5RIA9 395 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PLEKHS1Q5SXH7 462 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TMTC4Q5T4D3 741 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PRAMEF17Q5VTA0 474 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 AGAP7PQ5VUJ5 663 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CES4AQ5XG92 561 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PPP4R4Q6NUP7 873 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 DENND1BQ6P3S1 775 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 KRBA2Q6ZNG9 492 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ENOSF1Q7L5Y1 443 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 BNIPLQ7Z465 357 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 SRLQ86TD4 932 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 NLRP14Q86W24 1093 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF354CQ86Y25 554 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CAMK1DQ8IU85 385 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 GALNT13Q8IUC8 556 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CEP57L1Q8IYX8 460 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ADGRG5Q8IZF4 528 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 DSELQ8IZU8 1212 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 NDUFAF2Q8N183 169 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 WDTC1Q8N5D0 677 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ENDOVQ8N8Q3 282 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ZBTB34Q8NCN2 500 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ANKRD20A12PQ8NF67 263 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 EXD1Q8NHP7 514 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 LMO3Q8TAP4 145 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 CPT1BQ92523 772 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 NR4A3Q92570 626 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 PTERQ96BW5 349 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 NUS1Q96E22 293 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ARSGQ96EG1 525 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 DTD2Q96FN9 168 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 SCRN2Q96FV2 425 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 SLC35A4Q96G79 324 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ELMO2Q96JJ3 720 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 ZNF514Q96K75 400 aaPredicted RBP3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 C18orf12Q96KH6 178 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 AGAP4Q96P64 663 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TGM7Q96PF1 710 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 TRAPPC9Q96Q05 1148 aa3.53□□□□□ -1.84
PDLIM5-218ENST00000513341 USP28Q96RU2 1077 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms