RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 TRIM45Q9H8W5 580 aaPredicted RBP10.52□□□□□ -0.73
RNF4-218ENST00000513284 MMP25Q9NPA2 562 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 SLC39A10Q9ULF5 831 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 FAM169AQ9Y6X4 670 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 P2RX6O15547 441 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 PSMD3O43242 534 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 HS6ST1O60243 411 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 SLC25A12O75746 678 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 SUN1O94901 812 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 GAS8O95995 478 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 PSMB4P28070 264 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 PCSK6P29122 969 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 FOXN2P32314 431 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 CTNNA1P35221 906 aaKnown RBP10.51□□□□□ -0.73
RNF4-218ENST00000513284 RWDD2BP57060 319 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 GXYLT1Q4G148 440 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 SYTL3Q4VX76 610 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 RTL6Q6ICC9 239 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 PAQR7Q86WK9 346 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 SULF2Q8IWU5 870 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 CIARTQ8N365 385 aaPredicted RBP10.51□□□□□ -0.73
RNF4-218ENST00000513284 CSNK1A1LQ8N752 337 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 FAM98AQ8NCA5 519 aaKnown RBP10.51□□□□□ -0.73
RNF4-218ENST00000513284 ACRBPQ8NEB7 543 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 ACTL9Q8TC94 416 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 METTL21AQ8WXB1 218 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 RMND5BQ96G75 393 aaPredicted RBP10.51□□□□□ -0.73
RNF4-218ENST00000513284 TBL1YQ9BQ87 522 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 OSBPL8Q9BZF1 889 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 SLC24A3Q9HC58 644 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 CRIM1Q9NZV1 1036 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 PCDHA13Q9Y5I0 950 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 NFS1Q9Y697 457 aa10.51□□□□□ -0.73
RNF4-218ENST00000513284 MXRA5Q9NR99 2828 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 A0A0G2JNJ9 132 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 CCDC162PA2VCL2 907 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 PJA2O43164 708 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 PRPF4O43172 522 aaKnown RBP eCLIP10.5□□□□□ -0.73
RNF4-218ENST00000513284 C1orf105O95561 183 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 OR56A5P0C7T3 313 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 GLI4P10075 376 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 TPP2P29144 1249 aaPredicted RBP10.5□□□□□ -0.73
RNF4-218ENST00000513284 PTPN7P35236 360 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 P3H1Q32P28 736 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 GARNL3Q5VVW2 1013 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 PAMR1Q6UXH9 720 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 UNC5DQ6UXZ4 953 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 PRSS41Q7RTY9 318 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 RPS19BP1Q86WX3 136 aaKnown RBP10.5□□□□□ -0.73
RNF4-218ENST00000513284 TXLNBQ8N3L3 684 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 KIF2BQ8N4N8 673 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 HORMAD2Q8N7B1 307 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 OR9A4Q8NGU2 314 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 ELP5Q8TE02 316 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 STYXQ8WUJ0 223 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 PLCD4Q9BRC7 762 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 ACAT2Q9BWD1 397 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 TRIM5Q9C035 493 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 DRC3Q9H069 523 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 GOLPH3Q9H4A6 298 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 Q9UFV3 132 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 PCDHA3Q9Y5H8 950 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 DNAJC13O75165 2243 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 ZNF407Q9C0G0 2248 aa10.5□□□□□ -0.73
RNF4-218ENST00000513284 MROH6A6NGR9 719 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 A6NNC1 897 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 USP27XA6NNY8 438 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 CDC40O60508 579 aaKnown RBP eCLIP10.49□□□□□ -0.731e-6■□□□□ 8.2
RNF4-218ENST00000513284 ANXA5P08758 320 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 ERVK-10P10266 1014 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 MSNP26038 577 aaKnown RBP10.49□□□□□ -0.73
RNF4-218ENST00000513284 AOAHP28039 575 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 PPARGP37231 505 aaPredicted RBP10.49□□□□□ -0.73
RNF4-218ENST00000513284 ADH7P40394 386 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 KIR2DL3P43628 341 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 BDKRB1P46663 353 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 MARCKSL1P49006 195 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 FAM53BQ14153 422 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 SEMA3AQ14563 771 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 EXT1Q16394 746 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 PARP6Q2NL67 630 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 KCTD11Q693B1 232 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 ZNF425Q6IV72 752 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 ACAD11Q709F0 780 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 LGI4Q8N135 537 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 KRT222Q8N1A0 295 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 ZFP62Q8NB50 900 aaPredicted RBP10.49□□□□□ -0.73
RNF4-218ENST00000513284 OR51Q1Q8NH59 317 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 ASZ1Q8WWH4 475 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 KRT35Q92764 455 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 RAD51AP1Q96B01 352 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 TTYH2Q9BSA4 534 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 CARD6Q9BX69 1037 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 TSSK1BQ9BXA7 367 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 DEFB127Q9H1M4 99 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 PLEKHF2Q9H8W4 249 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 LRRC40Q9H9A6 602 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 PNPLA3Q9NST1 481 aa10.49□□□□□ -0.73
RNF4-218ENST00000513284 PIH1D1Q9NWS0 290 aaKnown RBP10.49□□□□□ -0.73
RNF4-218ENST00000513284 CBLCQ9ULV8 474 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms