RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ACSS2Q9NR19 701 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 IMP3Q9NV31 184 aaKnown RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 AIG1Q9NVV5 245 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 C1orf109Q9NX04 203 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 ANKMY1Q9P2S6 941 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 TBC1D29Q9UFV1 150 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 APOBEC3BQ9UH17 382 aaKnown RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 ZNF490Q9ULM2 529 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 PSMD13Q9UNM6 376 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 CLCA2Q9UQC9 943 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 WDR37Q9Y2I8 494 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 RNF11Q9Y3C5 154 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 TIMM22Q9Y584 194 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 KLK4Q9Y5K2 254 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 CSNK1G3Q9Y6M4 447 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 TNRC6BQ9UPQ9 1833 aaKnown RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 LRP4O75096 1905 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 ZFHX4Q86UP3 3567 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 ASPMQ8IZT6 3477 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 A0A1W2PPV9 198 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 E7EQ34 232 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PSMD12O00232 456 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SNPHO15079 494 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 ATXN7O15265 892 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PRICKLE3O43900 615 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PRMT3O60678 531 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 LINC00032P0C843 101 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PRPS2P11908 318 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 JAK1P23458 1154 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 ACP1P24666 158 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PIK3R1P27986 724 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 EIF2S3P41091 472 aaKnown RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 GSTM5P46439 218 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PCBP4P57723 403 aaKnown RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 C21orf58P58505 322 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 UBE2IP63279 158 aaKnown RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 DAB2P98082 770 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PRDX1Q06830 199 aaKnown RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SF3A3Q12874 501 aaKnown RBP eCLIP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 CYLC2Q14093 348 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 CLCA4Q14CN2 919 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 ABRAXAS2Q15018 415 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 NR6A1Q15406 480 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 CPSF6Q16630 551 aaKnown RBP eCLIP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 IMPG1Q17R60 797 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 DPY19L1Q2PZI1 675 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SOWAHCQ53LP3 525 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 CCDC157Q569K6 752 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SPIN4Q56A73 249 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 CACHD1Q5VU97 1274 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 GALNT18Q6P9A2 607 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 NXPE4Q6UWF7 544 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 DHRS13Q6UX07 377 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 HACD2Q6Y1H2 254 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 Q6ZSR9 355 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SLC9B2Q86UD5 537 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 GKN2Q86XP6 184 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 FAM129CQ86XR2 697 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 TREML1Q86YW5 311 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SFRP1Q8N474 314 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 OR52E1Q8NGJ3 308 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 OR2I1PQ8NGU4 316 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 DNAJB8Q8NHS0 232 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SAP25Q8TEE9 199 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SELENOMQ8WWX9 145 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 TSACCQ96A04 125 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SH3KBP1Q96B97 665 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PYCR2Q96C36 320 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SLC7A6OSQ96CW6 309 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 CDK15Q96Q40 435 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 AIF1LQ9BQI0 150 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 BTBD10Q9BSF8 475 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 TMEM168Q9H0V1 697 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 RHBGQ9H310 441 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 LRTM1Q9HBL6 345 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SLC40A1Q9NP59 571 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PRDM8Q9NQV8 689 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 THSD1Q9NS62 852 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 ARL8BQ9NVJ2 186 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 TAAR2Q9P1P5 351 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 ARMCX1Q9P291 453 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 SPASTQ9UBP0 616 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 EIF3LQ9Y262 564 aaKnown RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 CA5BQ9Y2D0 317 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 TDRKHQ9Y2W6 561 aaKnown RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 RRP15Q9Y3B9 282 aaKnown RBP8.76□□□□□ -1.01
NR1I3-228ENST00000511676 FIS1Q9Y3D6 152 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 GPR45Q9Y5Y3 372 aa8.76□□□□□ -1.01
NR1I3-228ENST00000511676 PCDH15Q96QU1 1955 aa8.75□□□□□ -1.01
NR1I3-228ENST00000511676 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
NR1I3-228ENST00000511676 ANKRD11Q6UB99 2663 aaPredicted RBP8.75□□□□□ -1.01
NR1I3-228ENST00000511676 CABIN1Q9Y6J0 2220 aa8.75□□□□□ -1.01
NR1I3-228ENST00000511676 PIPSLA2A3N6 862 aa8.75□□□□□ -1.01
NR1I3-228ENST00000511676 LILRA5A6NI73 299 aa8.75□□□□□ -1.01
NR1I3-228ENST00000511676 PRAMEF4O60810 478 aa8.75□□□□□ -1.01
NR1I3-228ENST00000511676 SEMA3DO95025 777 aa8.75□□□□□ -1.01
NR1I3-228ENST00000511676 NPPAP01160 153 aa8.75□□□□□ -1.01
NR1I3-228ENST00000511676 COX4I1P13073 169 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms