RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 ZNF846Q147U1 533 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 NR1D2Q14995 579 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 SPCS2Q15005 226 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 TEAD4Q15561 434 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 ARHGAP15Q53QZ3 475 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 ARSIQ5FYB1 569 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 FAHD1Q6P587 224 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 VTCN1Q7Z7D3 282 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 ADIPOR2Q86V24 386 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 NPAS3Q8IXF0 933 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 NRSN1Q8IZ57 195 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 CLECL1Q8IZS7 167 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 SLC15A4Q8N697 577 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 C1orf52Q8N6N3 182 aaKnown RBP13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 ABHD11Q8NFV4 315 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 GLYATL1Q969I3 302 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 LRIG1Q96JA1 1093 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 BARD1Q99728 777 aaKnown RBP13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 SPHK2Q9NRA0 654 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 TMEM39AQ9NV64 488 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 DKK3Q9UBP4 350 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 ZNF282Q9UDV7 671 aaPredicted RBP13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 FZD4Q9ULV1 537 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 CCL26Q9Y258 94 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 PCDHGB3Q9Y5G1 929 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 KCNE2Q9Y6J6 123 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 TSPAN6O43657 245 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 RGS10O43665 173 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 GABARAPO95166 117 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 HNRNPCP07910 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 CYP4B1P13584 511 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 FMO3P31513 532 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 SERPINB10P48595 397 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 PRLHRP49683 370 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 MAD2L1BPQ15013 274 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 CTF1Q16619 201 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ZNF805Q5CZA5 627 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 MED27Q6P2C8 311 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 TECPR1Q7Z6L1 1165 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 KIAA0907Q7Z7F0 614 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 C11orf65Q8NCR3 313 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 OR7G3Q8NG95 312 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 CHPT1Q8WUD6 406 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ZNF296Q8WUU4 475 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 S100ZQ8WXG8 99 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 YME1L1Q96TA2 773 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 PKP4Q99569 1192 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 PITX2Q99697 317 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 HMG20AQ9NP66 347 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 THUMPD1Q9NXG2 353 aaKnown RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ATP6V1HQ9UI12 483 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 PCDHGA10Q9Y5H3 936 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 HTTP42858 3142 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 KRT87PA6NCN2 255 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 FADS2P1A8MWK0 482 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 CLDN25C9JDP6 229 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 RNASET2O00584 256 aaKnown RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 NRG2O14511 850 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 CCL16O15467 120 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 FAM20BO75063 409 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 SRPRAP08240 638 aaKnown RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 OCM2P0CE71 109 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 OCMP0CE72 109 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 IDSP22304 550 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 PTX3P26022 381 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ACVR2AP27037 513 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 TIA1P31483 386 aaKnown RBP eCLIP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 RPL3P39023 403 aaKnown RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ST13P50502 369 aaKnown RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 RAE1P78406 368 aaKnown RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 AQP6Q13520 282 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 E2F2Q14209 437 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 RGNQ15493 299 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 SYT6Q5T7P8 510 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ERAP2Q6P179 960 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 DCDC5Q6ZRR9 648 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 RASGEF1AQ8N9B8 481 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 FBXO15Q8NCQ5 510 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ZNF540Q8NDQ6 660 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ZFP90Q8TF47 636 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 YIPF6Q96EC8 236 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 VMP1Q96GC9 406 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 TPD52L3Q96J77 140 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 C7orf34Q96L11 122 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 DOHHQ9BU89 302 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 BHLHE41Q9C0J9 482 aaPredicted RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 WDR12Q9GZL7 423 aaKnown RBP13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 CHST8Q9H2A9 424 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 EPHX3Q9H6B9 360 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 RUBCNLQ9H714 662 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 TDP1Q9NUW8 608 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 ATAD3AQ9NVI7 634 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 SIRT5Q9NXA8 310 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 FAM8A1Q9UBU6 413 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 IL36AQ9UHA7 158 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 FBXO10Q9UK96 956 aa13.73□□□□□ -0.21
AP003555.1-202ENST00000511013 PADI2Q9Y2J8 665 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms