RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 NPPBP16860 134 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 ZNF37AP17032 561 aaPredicted RBP21.79■■□□□ 1.08
SNF8-209ENST00000510558 SAT1P21673 171 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 BCL6P41182 706 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 MAT1AQ00266 395 aaKnown RBP21.79■■□□□ 1.08
SNF8-209ENST00000510558 CBLBQ13191 982 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 TMEM207Q6UWW9 146 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 Q6ZS92 163 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 SLC26A11Q86WA9 606 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 ZC3H7AQ8IWR0 971 aaKnown RBP21.79■■□□□ 1.08
SNF8-209ENST00000510558 ZBED8Q8IZ13 594 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 OR9A4Q8NGU2 314 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 FBXL8Q96CD0 374 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 PDLIM5Q96HC4 596 aaKnown RBP21.79■■□□□ 1.08
SNF8-209ENST00000510558 MACROD1Q9BQ69 325 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 IKZF3Q9UKT9 509 aa21.79■■□□□ 1.08
SNF8-209ENST00000510558 LRRK2Q5S007 2527 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 FAM95CA0A1B0GW59 222 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 H0YIG0 161 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 LCMT2O60294 686 aaKnown RBP21.78■■□□□ 1.08
SNF8-209ENST00000510558 NSA2O95478 260 aaKnown RBP21.78■■□□□ 1.08
SNF8-209ENST00000510558 GUCA1CO95843 209 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 HEXBP07686 556 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 COX6A1P12074 109 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 CXCR2P25025 360 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 GRK3P35626 688 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 FAAH2Q6GMR7 532 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 TMEM214Q6NUQ4 689 aaKnown RBP21.78■■□□□ 1.08
SNF8-209ENST00000510558 SBSNQ6UWP8 590 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 IGFL2Q6UWQ7 119 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 PRSS41Q7RTY9 318 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 CAMKVQ8NCB2 501 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 SPATA4Q8NEY3 305 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 ATL1Q8WXF7 558 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 SNRNP40Q96DI7 357 aaKnown RBP21.78■■□□□ 1.08
SNF8-209ENST00000510558 TM4SF19Q96DZ7 209 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 WDR77Q9BQA1 342 aaPredicted RBP21.78■■□□□ 1.08
SNF8-209ENST00000510558 ERP44Q9BS26 406 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 DPH5Q9H2P9 285 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 CSAG2Q9Y5P2 127 aa21.78■■□□□ 1.08
SNF8-209ENST00000510558 NSG1A0A0A6YYJ2 146 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 IL1RNP18510 177 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 TAS2R39P59534 338 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 EEF1A2Q05639 463 aaKnown RBP21.77■■□□□ 1.08
SNF8-209ENST00000510558 CALCOCO2Q13137 446 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 CAPN12Q6ZSI9 719 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 NDUFAF7Q7L592 441 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 MAATS1Q7Z4T9 603 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 ASPGQ86U10 573 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 ABHD11Q8NFV4 315 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 ZCCHC10Q8TBK6 192 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 PPP4R1Q8TF05 950 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 C19orf60Q96EN9 201 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 OR4K3Q96R72 315 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 SLC29A3Q9BZD2 475 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 FAM129AQ9BZQ8 928 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 NSMCE4AQ9NXX6 385 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 WHRNQ9P202 907 aa21.77■■□□□ 1.08
SNF8-209ENST00000510558 NOVA2Q9UNW9 492 aaKnown RBP21.77■■□□□ 1.08
SNF8-209ENST00000510558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.77■■□□□ 1.08
SNF8-209ENST00000510558 A0A1W2PQ72 361 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 PCDH17O14917 1159 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 RAD51CO43502 376 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 BMP10O95393 424 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 CASQ1P31415 396 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 CCR8P51685 355 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 MEF2AQ02078 507 aaPredicted RBP21.76■■□□□ 1.07
SNF8-209ENST00000510558 C2orf54Q08AI8 447 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 ZNF460Q14592 562 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 PPP1R3AQ16821 1122 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 CUZD1Q86UP6 607 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 KBTBD2Q8IY47 623 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 C17orf53Q8N3J3 647 aaPredicted RBP21.76■■□□□ 1.07
SNF8-209ENST00000510558 NKAPQ8N5F7 415 aaKnown RBP21.76■■□□□ 1.07
SNF8-209ENST00000510558 CISD2Q8N5K1 135 aaKnown RBP21.76■■□□□ 1.07
SNF8-209ENST00000510558 MFSD9Q8NBP5 474 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 KCT2Q8NC54 265 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 PYROXD1Q8WU10 500 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 SLC13A3Q8WWT9 602 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 RHOJQ9H4E5 214 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 EPS8L2Q9H6S3 715 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 SAYSD1Q9NPB0 183 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 MKL2Q9ULH7 1088 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 PCDHGA10Q9Y5H3 936 aa21.76■■□□□ 1.07
SNF8-209ENST00000510558 IGHV1-45A0A0A0MS14 117 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 NPEPPSL1A6NEC2 478 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 TCP11X1B4DZS4 312 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 CDC7O00311 574 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 SLC35G6P0C7Q6 338 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 EFNA3P52797 238 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 ISLR2Q6UXK2 745 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 OR4K1Q8NGD4 311 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 ANKRD7Q92527 254 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 VPS39Q96JC1 886 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 MCMBPQ9BTE3 642 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 ANKHQ9HCJ1 492 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 SMYD2Q9NRG4 433 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 RIC8BQ9NVN3 520 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 ASF1BQ9NVP2 202 aa21.75■■□□□ 1.07
SNF8-209ENST00000510558 USP9XQ93008 2570 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms