RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 FARSAQ9Y285 508 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TTC26A0AVF1 554 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 USP17L23D6RBM5 183 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ACOT7O00154 380 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CNTN5O94779 1100 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 GLAP06280 429 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CHRM2P08172 466 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MTNR1BP49286 362 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TSPAN5P62079 268 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 PGM5Q15124 567 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ARMCX4Q5H9R4 360 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 OGFRL1Q5TC84 451 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 IRAK1BP1Q5VVH5 260 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SSX9Q7RTT3 188 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TBC1D26Q86UD7 250 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TIGD4Q8IY51 512 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CLEC4FQ8N1N0 589 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FBLIM1Q8WUP2 373 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 DLG3Q92796 817 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 DNASE1L2Q92874 299 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 APH1AQ96BI3 265 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 PTCHD1Q96NR3 888 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ZSCAN5AQ9BUG6 496 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MBNL1Q9NR56 388 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SMARCAL1Q9NZC9 954 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TRIM10Q9UDY6 481 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ARL2BPQ9Y2Y0 163 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 A0A0J9YVX5 310 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 A0A1W2PQ72 361 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CELF2O95319 508 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TGFB1P01137 390 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 POMCP01189 267 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 GZMAP12544 262 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 GLDCP23378 1020 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CD6P30203 668 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 OR1G1P47890 313 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 RPS6P62753 249 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SNX17Q15036 470 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CBWD5Q5RIA9 395 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 DENND2CQ68D51 928 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 FAM171BQ6P995 826 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TTC33Q6PID6 262 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TRAPPC5Q8IUR0 188 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 NKAIN3Q8N8D7 197 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MR1Q95460 341 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ANKRD36BP1Q96IX9 119 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 RNF170Q96K19 258 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 RIT2Q99578 217 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CHP1Q99653 195 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MECRQ9BV79 373 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 HES7Q9BYE0 225 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SEMA4AQ9H3S1 761 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SRD5A3Q9H8P0 318 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 KCMF1Q9P0J7 381 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CNOT6Q9ULM6 557 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SOX13Q9UN79 622 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 POFUT2Q9Y2G5 429 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ACTL7BQ9Y614 415 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PFASO15067 1338 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 KANSL1LA0AUZ9 987 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 FEZF1A0PJY2 475 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 NEMP2A6NFY4 417 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 DNALI1O14645 258 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SLC16A3O15427 465 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TM7SF2O76062 418 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ABHD16AO95870 558 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 KRT6AP02538 564 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 KRT6BP04259 564 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ITGB3P05106 788 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ATXN1LP0C7T5 689 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 KRT6CP48668 564 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PCYT1AP49585 367 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 DGKQP52824 942 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 BTN3A2P78410 334 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CBX1P83916 185 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PMS2P3Q13401 168 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TUBB2AQ13885 445 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CCNIQ14094 377 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 HNRNPDQ14103 355 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TRIP10Q15642 601 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ALG10Q5BKT4 473 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ALG10BQ5I7T1 473 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 RALGPS1Q5JS13 557 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CES4AQ5XG92 561 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 EFCAB12Q6NXP0 572 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 UNQ6494/PRO21346Q6UXR6 183 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 B3GLCTQ6Y288 498 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PARGQ86W56 976 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 GPBP1Q86WP2 473 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 RBM45Q8IUH3 476 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 HACE1Q8IYU2 909 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MINDY2Q8NBR6 621 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CHST13Q8NET6 341 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 OR14L1PQ8NHC6 308 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SOCS4Q8WXH5 440 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ANKRD7Q92527 254 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PYCR2Q96C36 320 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 AKR1E2Q96JD6 320 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MRGPRX3Q96LB0 322 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms