RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 DNAAF3Q8N9W5 541 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 OR52L2PQ8NGH6 319 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 CCDC12Q8WUD4 166 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 MAIP1Q8WWC4 291 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 SOCS4Q8WXH5 440 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PIGKQ92643 395 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 RFKQ969G6 155 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 IGSF8Q969P0 613 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 MOAP1Q96BY2 351 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 RHBDF1Q96CC6 855 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ZNF479Q96JC4 524 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 SENP8Q96LD8 212 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 FYTTD1Q96QD9 318 aaKnown RBP4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 CPNE1Q99829 537 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 NMNAT2Q9BZQ4 307 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 AZI2Q9H6S1 392 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ZFP14Q9HCL3 533 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 HHATLQ9HCP6 504 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 DONSONQ9NYP3 566 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 RDH8Q9NYR8 311 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PKD2L2Q9NZM6 624 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 SERTAD3Q9UJW9 196 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 ADAM21Q9UKJ8 722 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PCDHA12Q9UN75 941 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 CHMP2BQ9UQN3 213 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 PRELID1Q9Y255 219 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 CEPT1Q9Y6K0 416 aa4.1□□□□□ -1.75
SMARCA5-202ENST00000508573 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 KANSL1LA0AUZ9 987 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 DUXAA6NLW8 204 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 TCP11X1B4DZS4 312 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ANKRD66B4E2M5 251 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 H3BMM5 538 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ZNF701M0R085 212 aaPredicted RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 PSMD11O00231 422 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 KLF11O14901 512 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 CDH16O75309 829 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ZNF217O75362 1048 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 WBP4O75554 376 aaKnown RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 JRKO75564 520 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 KRT36O76013 467 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 SORBS2O94875 1100 aaKnown RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ACSL3O95573 720 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 BMP15O95972 392 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 MBD3O95983 291 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 MT-ND1P03886 318 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 IGFBP1P08833 259 aaPredicted RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 STAG3L1P0CL83 205 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 SLC2A3P11169 496 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 UMPSP11172 480 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 VPREB1P12018 145 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ANPEPP15144 967 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 PRKACAP17612 351 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 TNNI3P19429 210 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 HNF1AP20823 631 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 PTNP21246 168 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 HLA-FP30511 346 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 HOXA6P31267 233 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 GABRA5P31644 462 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 CHI3L1P36222 383 aaPredicted RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 GPR4P46093 362 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 RGS7P49802 495 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 MTHFSP49914 203 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ZNF75DP51815 510 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 GSCP56915 257 aaPredicted RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 SLC37A1P57057 533 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 IRX1P78414 480 aaPredicted RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 PDE1BQ01064 536 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 MC2RQ01718 297 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 BNC1Q01954 994 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 DYRK1AQ13627 763 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 GK2Q14410 553 aaPredicted RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 KRT33BQ14525 404 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ZSCAN26Q16670 478 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 FAM76BQ5HYJ3 339 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 EFHC1Q5JVL4 640 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ZNF626Q68DY1 528 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ATL3Q6DD88 541 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 C11orf87Q6NUJ2 197 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 KYAT3Q6YP21 454 aaKnown RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 SLC39A5Q6ZMH5 540 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 TMPRSS9Q7Z410 1059 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 GPR142Q7Z601 462 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 PHLDB2Q86SQ0 1253 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 IGFN1Q86VF2 1251 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 TMEM173Q86WV6 379 aaPredicted RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ECHDC2Q86YB7 292 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 TMEM126BQ8IUX1 230 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 LAX1Q8IWV1 398 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 C12orf56Q8IXR9 622 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 UBQLNLQ8IYU4 475 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ADGRF3Q8IZF5 1079 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 APCDD1Q8J025 514 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 NECAB1Q8N987 351 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 ASCC1Q8N9N2 400 aaKnown RBP4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 KIAA0895Q8NCT3 520 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 SPATA4Q8NEY3 305 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 OR6S1Q8NH40 331 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 BBS10Q8TAM1 723 aa4.09□□□□□ -1.75
SMARCA5-202ENST00000508573 FAM76AQ8TAV0 307 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms